RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 WRAP73Q9P2S5 460 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 TCEAL9Q9UHQ7 104 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 SLC8A2Q9UPR5 921 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 RAI2Q9Y5P3 530 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 COL6A6A6NMZ7 2263 aa9.85□□□□□ -0.83
TRAPPC9-212ENST00000521944 H0Y626 953 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 I3L4J1 428 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 PRC1O43663 620 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 GAS7O60861 476 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 TRIM16O95361 564 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 AVPP01185 164 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 LRG1P02750 347 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 ATF2P15336 505 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 AXLP30530 894 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 LIFRP42702 1097 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 MBTD1Q05BQ5 628 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 TMEM196Q5HYL7 178 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 NAIF1Q69YI7 327 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 PDXDC1Q6P996 788 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 PDZD4Q76G19 769 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 ARID3BQ8IVW6 561 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 C3orf58Q8NDZ4 430 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 PSPC1Q8WXF1 523 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 EZH1Q92800 747 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 TMEM209Q96SK2 561 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 HNRNPABQ99729 332 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 C1QTNF2Q9BXJ5 285 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 TMEM74BQ9NUR3 256 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 EBF1Q9UH73 591 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 MBD1Q9UIS9 605 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 INSL5Q9Y5Q6 135 aa9.84□□□□□ -0.83
TRAPPC9-212ENST00000521944 A0A1B0GUA9 196 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 CCDC69A6NI79 296 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 J3QL48 77 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 HIP1O00291 1037 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 EML1O00423 815 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 ERLIN2O94905 339 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 NPTXRO95502 500 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 EGFP01133 1207 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 MYL4P12829 197 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 MAPK8P45983 427 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 ELAVL2Q12926 359 aaKnown RBP9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 CYP4A22Q5TCH4 519 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 LRCH2Q5VUJ6 765 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 NFXL1Q6ZNB6 911 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 MIER3Q7Z3K6 550 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 MICU3Q86XE3 530 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZNF843Q8N446 348 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 RDM1Q8NG50 284 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 MTA3Q9BTC8 594 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 LRRC2Q9BYS8 371 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 SLC32A1Q9H598 525 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 FSCN3Q9NQT6 498 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 PARP2Q9UGN5 583 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 EVLQ9UI08 416 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZMYM2Q9UBW7 1377 aa9.83□□□□□ -0.84
TRAPPC9-212ENST00000521944 SPTAN1Q13813 2472 aaKnown RBP9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 KNL1Q8NG31 2342 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 ANTXRLA6NF34 631 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 PRRG1O14668 218 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZBTB39O15060 712 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 CD59P13987 128 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 ENGP17813 658 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 BRCC3P46736 316 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 TRIM61Q5EBN2 209 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 TMC8Q8IU68 726 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 YAF2Q8IY57 180 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 TMTC2Q8N394 836 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 PNPLA1Q8N8W4 532 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 EPS8L1Q8TE68 723 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 PIGKQ92643 395 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 E2F7Q96AV8 911 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 CCDC136Q96JN2 1154 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 CAMK1GQ96NX5 476 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 CDK15Q96Q40 435 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 ZMYND12Q9H0C1 365 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 GLT8D2Q9H1C3 349 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 CYP4F11Q9HBI6 524 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 XPNPEP1Q9NQW7 623 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 SLC12A7Q9Y666 1083 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 NOTCH2Q04721 2471 aa9.82□□□□□ -0.84
TRAPPC9-212ENST00000521944 PTPRBP23467 1997 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 A0A087WV48 116 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 A0A1W2PRU2 124 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 TMEM189-UBE2V1I3L0A0 370 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 INO80B-WBP1J3KQ70 363 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 TRDMT1O14717 391 aaKnown RBP9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 ATG13O75143 517 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 VNN2O95498 520 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 PRAMEF12O95522 483 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 ADH1CP00326 375 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 THP07101 528 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 GBP1P32455 592 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 CLCNKBP51801 687 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 PSMC5P62195 406 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 TWF1Q12792 350 aa9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 MRPL58Q14197 206 aaKnown RBP9.81□□□□□ -0.84
TRAPPC9-212ENST00000521944 PCBP1Q15365 356 aaKnown RBP eCLIP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms