RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 GGA3Q9NZ52 723 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 KAT6AQ92794 2004 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 UBOX5O94941 541 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 FSBPO95073 299 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 UNGP13051 313 aaPredicted RBP12.88□□□□□ -0.35
DENND3-217ENST00000521835 PTPRAP18433 802 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 ELF1P32519 619 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 GAD2Q05329 585 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 MAMLD1Q13495 774 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 MPP2Q14168 576 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 ZACNQ401N2 412 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
DENND3-217ENST00000521835 GPAT2Q6NUI2 795 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 GADL1Q6ZQY3 521 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 NIPA1Q7RTP0 329 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 SPATS2Q86XZ4 545 aaKnown RBP12.88□□□□□ -0.35
DENND3-217ENST00000521835 RHPN2Q8IUC4 686 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 RHOT1Q8IXI2 618 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 ZBED8Q8IZ13 594 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 PGM2Q96G03 612 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
DENND3-217ENST00000521835 RUNDC3BQ96NL0 473 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 TGS1Q96RS0 853 aaKnown RBP12.88□□□□□ -0.35
DENND3-217ENST00000521835 PNMA3Q9UL41 463 aa12.88□□□□□ -0.35
DENND3-217ENST00000521835 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
DENND3-217ENST00000521835 F5H423 210 aaPredicted RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 PROSCO94903 275 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 LYPLA2O95372 231 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 SUPT20HL2P0C7V6 817 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 SUPT20HL1Q3ZLR7 823 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 XKR3Q5GH77 459 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.87□□□□□ -0.35
DENND3-217ENST00000521835 NKIRAS1Q9NYS0 192 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 CPSF2Q9P2I0 782 aaKnown RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 CCT8L1PA6NM43 557 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 PLA2G6O60733 806 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 GRAP2O75791 330 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 OATP04181 439 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 ATP4AP20648 1035 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 NOMO3P69849 1222 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 CDO1Q16878 200 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 CCDC63Q8NA47 563 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 ATL2Q8NHH9 583 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 NSRP1Q9H0G5 558 aaKnown RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 STMN4Q9H169 189 aaPredicted RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 POLIQ9UNA4 740 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 FSCN2O14926 492 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 MAFGO15525 162 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 GGPS1O95749 300 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 TTC4O95801 387 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 GCNT1Q02742 428 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 NFX1Q12986 1120 aaKnown RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 DNAJC3Q13217 504 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 MTA1Q13330 715 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 ZNF772Q68DY9 489 aaPredicted RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 SCYL3Q8IZE3 742 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 ZNF606Q8WXB4 792 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 HSPH1Q92598 858 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 GPRASP2Q96D09 838 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
DENND3-217ENST00000521835 LRRC19Q9H756 370 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 ARHGAP28Q9P2N2 729 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 NAALADL1Q9UQQ1 740 aa12.87□□□□□ -0.35
DENND3-217ENST00000521835 BHMG1C9JSJ3 638 aaPredicted RBP12.86□□□□□ -0.35
DENND3-217ENST00000521835 NOP56O00567 594 aaKnown RBP12.86□□□□□ -0.35
DENND3-217ENST00000521835 TMEM191BP0C7N4 346 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 FDX1P10109 184 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 NEFHP12036 1026 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 STXBP2Q15833 593 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 CLUL1Q15846 466 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 SAMD3Q8N6K7 520 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 PRCCQ92733 491 aaPredicted RBP12.86□□□□□ -0.35
DENND3-217ENST00000521835 CALN1Q9BXU9 219 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 COQ4Q9Y3A0 265 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 B4GALT5O43286 388 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 CETN2P41208 172 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 KCNJ2P63252 427 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 CAPSQ13938 189 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 EFTUD2Q15029 972 aaKnown RBP eCLIP12.86□□□□□ -0.35
DENND3-217ENST00000521835 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
DENND3-217ENST00000521835 CRELD2Q6UXH1 353 aaPredicted RBP12.86□□□□□ -0.35
DENND3-217ENST00000521835 TRPM8Q7Z2W7 1104 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 PARP9Q8IXQ6 854 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 ABRAQ8N0Z2 381 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 GRK7Q8WTQ7 553 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 TRAIPQ9BWF2 469 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 ATAD5Q96QE3 1844 aa12.86□□□□□ -0.35
DENND3-217ENST00000521835 A8MUI8 341 aa12.85□□□□□ -0.35
DENND3-217ENST00000521835 C4BPAP04003 597 aaKnown RBP12.85□□□□□ -0.35
DENND3-217ENST00000521835 PECAM1P16284 738 aaPredicted RBP12.85□□□□□ -0.35
DENND3-217ENST00000521835 HADHBP55084 474 aaKnown RBP12.85□□□□□ -0.35
DENND3-217ENST00000521835 LACTBP83111 547 aaPredicted RBP12.85□□□□□ -0.35
DENND3-217ENST00000521835 NEDD9Q14511 834 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms