RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 TMEM134Q9H6X4 195 aa12.05□□□□□ -0.48
CLK4-206ENST00000520878 COX16Q9P0S2 106 aa12.05□□□□□ -0.48
CLK4-206ENST00000520878 PCDHA3Q9Y5H8 950 aa12.05□□□□□ -0.48
CLK4-206ENST00000520878 SNX9Q9Y5X1 595 aa12.05□□□□□ -0.48
CLK4-206ENST00000520878 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
CLK4-206ENST00000520878 LACTBL1A8MY62 500 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 CES2O00748 559 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 CYP1A2P05177 515 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 MYL3P08590 195 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 NFICP08651 508 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 KRT3P12035 628 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
CLK4-206ENST00000520878 OR6B3Q8NGW1 331 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 ACAP3Q96P50 834 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 PRMT7Q9NVM4 692 aaPredicted RBP12.04□□□□□ -0.48
CLK4-206ENST00000520878 KLK14Q9P0G3 267 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 HES2Q9Y543 173 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 F8VP50 259 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 O00370 1275 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 CALB1P05937 261 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 MYBL1P10243 752 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 RPL21P46778 160 aaKnown RBP12.04□□□□□ -0.48
CLK4-206ENST00000520878 SYCP2LQ5T4T6 812 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 ZNF572Q7Z3I7 529 aaPredicted RBP12.04□□□□□ -0.48
CLK4-206ENST00000520878 ZNF677Q86XU0 584 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 CDT1Q9H211 546 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 SEMA4AQ9H3S1 761 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 MLXIPLQ9NP71 852 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
CLK4-206ENST00000520878 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 MSCO60682 206 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 VIMP08670 466 aaKnown RBP12.04□□□□□ -0.48
CLK4-206ENST00000520878 ATP11AP98196 1134 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 RASGEF1CQ8N431 466 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 MIS12Q9H081 205 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 IP6K2Q9UHH9 426 aa12.04□□□□□ -0.48
CLK4-206ENST00000520878 BTBD19C9JJ37 291 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 ATG7O95352 703 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 AP3M2P53677 418 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 HUNKP57058 714 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 TMEM132DQ14C87 1099 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 HADHQ16836 314 aaKnown RBP12.03□□□□□ -0.48
CLK4-206ENST00000520878 JADE1Q6IE81 842 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 KIAA0319LQ8IZA0 1049 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 GRK7Q8WTQ7 553 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 HPDLQ96IR7 371 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 PRDM4Q9UKN5 801 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.03□□□□□ -0.48
CLK4-206ENST00000520878 HMGB1P1B2RPK0 211 aaPredicted RBP12.03□□□□□ -0.48
CLK4-206ENST00000520878 GPR25O00155 361 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 PROSCO94903 275 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 PDGFRBP09619 1106 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 NEFHP12036 1026 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 TAS2R40P59535 323 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 UAP1Q16222 522 aaPredicted RBP12.03□□□□□ -0.48
CLK4-206ENST00000520878 FAM102AQ5T9C2 384 aaPredicted RBP12.03□□□□□ -0.48
CLK4-206ENST00000520878 LRRC31Q6UY01 552 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 B4GALNT4Q76KP1 1039 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 RFX6Q8HWS3 928 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 CCDC89Q8N998 374 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 KCTD6Q8NC69 237 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 MDM1Q8TC05 714 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 C9orf72Q96LT7 481 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 OSMRQ99650 979 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 UBXN6Q9BZV1 441 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 VPS37BQ9H9H4 285 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 GBA2Q9HCG7 927 aaPredicted RBP12.03□□□□□ -0.48
CLK4-206ENST00000520878 SLC5A4Q9NY91 659 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 POC1B-GALNT4F8VUJ3 575 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 MED7O43513 233 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 NPTXRO95502 500 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 DESP17661 470 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 SLC1A1P43005 524 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 PSMC4P43686 418 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 NOMO3P69849 1222 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 MAMLD1Q13495 774 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 TTC27Q6P3X3 843 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 IQCKQ8N0W5 287 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 LENG1Q96BZ8 264 aaPredicted RBP12.03□□□□□ -0.48
CLK4-206ENST00000520878 PWWP2AQ96N64 755 aa12.03□□□□□ -0.48
CLK4-206ENST00000520878 RASGRF2O14827 1237 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 MAGEB2O15479 319 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 ASAP2O43150 1006 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 ASS1P00966 412 aaKnown RBP12.02□□□□□ -0.48
CLK4-206ENST00000520878 HSPA9P38646 679 aaKnown RBP12.02□□□□□ -0.48
CLK4-206ENST00000520878 KYNUQ16719 465 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 FAM182AQ5T1J6 154 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 TMC3Q7Z5M5 1100 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.48
CLK4-206ENST00000520878 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 CCDC77Q9BR77 488 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 SYT11Q9BT88 431 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 C10orf88Q9H8K7 445 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 HESX1Q9UBX0 185 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 TMEM59LQ9UK28 342 aa12.02□□□□□ -0.48
CLK4-206ENST00000520878 GAS2O43903 313 aaKnown RBP12.02□□□□□ -0.49
CLK4-206ENST00000520878 MAP3K6O95382 1288 aa12.02□□□□□ -0.49
CLK4-206ENST00000520878 GTF2A2P52657 109 aa12.02□□□□□ -0.49
CLK4-206ENST00000520878 TNFAIP2Q03169 654 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms