RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 HEMK1Q9Y5R4 338 aaPredicted RBP10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 FAM237BA0A1B0GVD1 139 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 IQCA1LA6NCM1 817 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 CDH16O75309 829 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 B3GALNT1O75752 331 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 TMEM253P0C7T8 217 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 BCRP11274 1271 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 DDX5P17844 614 aaKnown RBP10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 MSX2P35548 267 aaPredicted RBP10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 PLEKHG4Q58EX7 1191 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 DPP8Q6V1X1 898 aaPredicted RBP10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ARHGEF19Q8IW93 802 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 HAS1Q92839 578 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ZNF512BQ96KM6 892 aaPredicted RBP10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 KCTD10Q9H3F6 313 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ANLNQ9NQW6 1124 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 GINM1Q9NU53 330 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 EURLQ9NYK6 297 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 APPL1Q9UKG1 709 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 DSEQ9UL01 958 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 LOC100653049A0A140TA62 436 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 KRT34O76011 436 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 RALAP11233 206 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 MAGEA4P43358 317 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ATP13A4Q4VNC1 1196 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 PABPC1LQ4VXU2 614 aaKnown RBP10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ARSHQ5FYA8 562 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 C6orf163Q5TEZ5 329 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 PCNX4Q63HM2 1172 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 GLIS1Q8NBF1 620 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 LZICQ8WZA0 190 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 NACC2Q96BF6 587 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 SERPINB12Q96P63 405 aa10.64□□□□□ -0.71
PDGFRB-207ENST00000520579 ZMPSTE24O75844 475 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SORBS2O94875 1100 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 FGFR1P11362 822 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 BGNP21810 368 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SSTR1P30872 391 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 GPC5P78333 572 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 BBS9Q3SYG4 887 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 RNF43Q68DV7 783 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 UTS2BQ765I0 119 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ZSWIM2Q8NEG5 633 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 GSDMBQ8TAX9 411 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ZNF75CPQ92670 426 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ZNF184Q99676 751 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 CENPKQ9BS16 269 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SIX2Q9NPC8 291 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 DOLKQ9UPQ8 538 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 MED1Q15648 1581 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 F5H423 210 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 S100BP04271 92 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 MYL2P10916 166 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 CTNNA2P26232 953 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 MAPK4P31152 587 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 HOXA10P31260 410 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 FMO5P49326 533 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 PDIA2Q13087 525 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 GPS1Q13098 491 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 RINT1Q6NUQ1 792 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ANO5Q75V66 913 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ZNF804AQ7Z570 1209 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 CLNKQ7Z7G1 428 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SLC47A2Q86VL8 602 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 CPA5Q8WXQ8 436 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SNF8Q96H20 258 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 PPP1R36Q96LQ0 422 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 AGBL1Q96MI9 1066 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SLC4A9Q96Q91 983 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 PLA2G12BQ9BX93 195 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SLC13A1Q9BZW2 595 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 LIN28AQ9H9Z2 209 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 SAE1Q9UBE0 346 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 PRKAG3Q9UGI9 489 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 LTN1O94822 1766 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 MYH3P11055 1940 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 MARF1Q9Y4F3 1742 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 EMSYQ7Z589 1322 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 GPR75-ASB3A0A0A6YYF3 556 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 M0R2N6 131 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 GSC2O15499 205 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 PEX1O43933 1283 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 DKC1O60832 514 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 RNASEH1O60930 286 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 CCNB1P14635 433 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 CDK8P49336 464 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 GAD2Q05329 585 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 WDR72Q3MJ13 1102 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 TRIM67Q6ZTA4 783 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 CATSPER3Q86XQ3 398 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 NALCNQ8IZF0 1738 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ST13P4Q8IZP2 240 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 RAB3IL1Q8TBN0 382 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 AGR3Q8TD06 166 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 ART4Q93070 314 aa10.63□□□□□ -0.71
PDGFRB-207ENST00000520579 MTMR9Q96QG7 549 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms