RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 SCINQ9Y6U3 715 aa28.7■■■□□ 2.18
COL13A1-212ENST00000520133 CCDC66A2RUB6 948 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 PAEPP09466 180 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 BTBD6Q96KE9 485 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 SNX27Q96L92 541 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 RNPC3Q96LT9 517 aaKnown RBP28.69■■■□□ 2.18
COL13A1-212ENST00000520133 KRIT1O00522 736 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 MED7O43513 233 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 DCAF12L1Q5VU92 463 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 TTC39CQ8N584 583 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 TMEM40Q8WWA1 233 aa28.69■■■□□ 2.18
COL13A1-212ENST00000520133 DMGDHQ9UI17 866 aaKnown RBP28.69■■■□□ 2.18
COL13A1-212ENST00000520133 MYO1FO00160 1098 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 FGGP02679 453 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 CTNNA2P26232 953 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 SSTR3P32745 418 aaPredicted RBP28.68■■■□□ 2.18
COL13A1-212ENST00000520133 RAP1GAPP47736 663 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 CCNI2Q6ZMN8 369 aaPredicted RBP28.68■■■□□ 2.18
COL13A1-212ENST00000520133 HDAC7Q8WUI4 952 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 ALG3Q92685 438 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 CD101Q93033 1021 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 FUT8Q9BYC5 575 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 L1RE1Q9UN81 338 aa28.68■■■□□ 2.18
COL13A1-212ENST00000520133 PGK1P00558 417 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 CALB1P05937 261 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 CTNNA1P35221 906 aaKnown RBP28.67■■■□□ 2.18
COL13A1-212ENST00000520133 SLC1A1P43005 524 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 NKX3-2P78367 333 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 SP3Q02447 781 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 MYO1EQ12965 1108 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 CXCL17Q6UXB2 119 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 MMS22LQ6ZRQ5 1243 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 HDXQ7Z353 690 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 GTF2IRD1Q9UHL9 959 aa28.67■■■□□ 2.18
COL13A1-212ENST00000520133 PDCD11Q14690 1871 aaKnown RBP28.67■■■□□ 2.18
COL13A1-212ENST00000520133 M0QZ92 97 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 ZMYND10O75800 440 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 CD19P15391 556 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 MMP8P22894 467 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 GUCY2FP51841 1108 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 SLC7A5Q01650 507 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 PLEKHA7Q6IQ23 1121 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 AP1M1Q9BXS5 423 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 CELF4Q9BZC1 486 aaKnown RBP28.66■■■□□ 2.18
COL13A1-212ENST00000520133 SMYD3Q9H7B4 428 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 PCDHA3Q9Y5H8 950 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 TOMM70O94826 608 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 CDH5P33151 784 aaPredicted RBP28.66■■■□□ 2.18
COL13A1-212ENST00000520133 PEX5P50542 639 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 CDH8P55286 799 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 CACNB2Q08289 660 aaPredicted RBP28.66■■■□□ 2.18
COL13A1-212ENST00000520133 PTP4A2Q12974 167 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 NBPF20Q3BBV1 942 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 RSPH3Q86UC2 560 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 KLHL7Q8IXQ5 586 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 BEST2Q8NFU1 509 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 TFAP2BQ92481 460 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 KRT35Q92764 455 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 SDCBP2Q9H190 292 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 PARVAQ9NVD7 372 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 FAM53CQ9NYF3 392 aa28.66■■■□□ 2.18
COL13A1-212ENST00000520133 SPDYE4A6NLX3 237 aa28.65■■■□□ 2.18
COL13A1-212ENST00000520133 AOC2O75106 756 aa28.65■■■□□ 2.18
COL13A1-212ENST00000520133 CILPO75339 1184 aa28.65■■■□□ 2.18
COL13A1-212ENST00000520133 RAD23BP54727 409 aa28.65■■■□□ 2.18
COL13A1-212ENST00000520133 C2CD6Q53TS8 623 aa28.65■■■□□ 2.18
COL13A1-212ENST00000520133 SEL1L2Q5TEA6 688 aa28.65■■■□□ 2.18
COL13A1-212ENST00000520133 NXF3Q9H4D5 531 aaKnown RBP28.65■■■□□ 2.18
COL13A1-212ENST00000520133 CNTN3Q9P232 1028 aa28.65■■■□□ 2.18
COL13A1-212ENST00000520133 MAMLD1Q13495 774 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 PPP2R5EQ16537 467 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 DEFB115Q30KQ5 88 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 PHLDB2Q86SQ0 1253 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 IFT20Q8IY31 132 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 TMEM130Q8N3G9 435 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 C1orf131Q8NDD1 294 aaKnown RBP28.64■■■□□ 2.18
COL13A1-212ENST00000520133 CAPNS2Q96L46 248 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 TSPAN18Q96SJ8 248 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 HES2Q9Y543 173 aa28.64■■■□□ 2.18
COL13A1-212ENST00000520133 GOLGA6L10A0A0M3HER8 536 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 RECQL4O94761 1208 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 HSPA6P17066 643 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 TNFRSF8P28908 595 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 ZBTB6Q15916 424 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 ALKAL1Q6UXT8 129 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 KRT222Q8N1A0 295 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 PLVAPQ9BX97 442 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 LHX5Q9H2C1 402 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 XPNPEP3Q9NQH7 507 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 SCN1AP35498 2009 aa28.64■■■□□ 2.17
COL13A1-212ENST00000520133 SASH3O75995 380 aa28.63■■■□□ 2.17
COL13A1-212ENST00000520133 HEXIM1O94992 359 aaKnown RBP28.63■■■□□ 2.17
COL13A1-212ENST00000520133 RWDD2BP57060 319 aa28.63■■■□□ 2.17
COL13A1-212ENST00000520133 MRPS25P82663 173 aaKnown RBP28.63■■■□□ 2.17
COL13A1-212ENST00000520133 MRPS6P82932 125 aaKnown RBP28.63■■■□□ 2.17
COL13A1-212ENST00000520133 ZNF211Q13398 564 aaPredicted RBP28.63■■■□□ 2.17
COL13A1-212ENST00000520133 TMEM176AQ96HP8 235 aa28.63■■■□□ 2.17
COL13A1-212ENST00000520133 ZMAT2Q96NC0 199 aaKnown RBP28.63■■■□□ 2.17
COL13A1-212ENST00000520133 SLITRK6Q9H5Y7 841 aa28.63■■■□□ 2.17
COL13A1-212ENST00000520133 BARX2Q9UMQ3 279 aaPredicted RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms