RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 HES2Q9Y543 173 aa11.29□□□□□ -0.6
BRD9-216ENST00000518251 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
BRD9-216ENST00000518251 MICAL3Q7RTP6 2002 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 ZSCAN12O43309 604 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 GFPT2O94808 682 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 NDUFA10O95299 355 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 ASS1P00966 412 aaKnown RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 PLEKP08567 350 aaPredicted RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 CCDC175P0C221 793 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 CCDC172P0C7W6 258 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 PNMA6AP0CW24 399 aaPredicted RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 TBXAS1P24557 533 aaPredicted RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 AKAP5P24588 427 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 PRKCIP41743 596 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 RAB27AP51159 221 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 ARID5AQ03989 594 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 DSC3Q14574 896 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 ZNF699Q32M78 642 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 HGSNATQ68CP4 663 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 ADHFE1Q8IWW8 467 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 CCAR2Q8N163 923 aaKnown RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 C1orf127Q8N9H9 656 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 KAT5Q92993 513 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 TSPAN18Q96SJ8 248 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 YME1L1Q96TA2 773 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 NSUN3Q9H649 340 aaKnown RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 APOBEC3GQ9HC16 384 aaKnown RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 PCDHB2Q9Y5E7 798 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
BRD9-216ENST00000518251 WDFY4Q6ZS81 3184 aa11.28□□□□□ -0.6
BRD9-216ENST00000518251 EIF3CLB5ME19 914 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 AKR1B10O60218 316 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 MGEA5O60502 916 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 TBX10O75333 385 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 IPO7O95373 1038 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 CST3P01034 146 aaPredicted RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 ITGB3P05106 788 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 KRT19P08727 400 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 ITGA4P13612 1032 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 ANXA13P27216 316 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 EIF4A3P38919 411 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 KIF11P52732 1056 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 MYL6P60660 151 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 CUL2Q13617 745 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 SGSM1Q2NKQ1 1148 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 XKR4Q5GH76 650 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 HFE2Q6ZVN8 426 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 ACRBPQ8NEB7 543 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 BEST2Q8NFU1 509 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 SHC3Q92529 594 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 TAF4BQ92750 862 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 TATDN2Q93075 761 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 ELMO3Q96BJ8 720 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 EIF3CQ99613 913 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 NIF3L1Q9GZT8 377 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 KCNH6Q9H252 994 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 HAUS4Q9H6D7 363 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 SPTLC3Q9NUV7 552 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 TRMT1Q9NXH9 659 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 DPP3Q9NY33 737 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 PPP2R2CQ9Y2T4 447 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 R3HCC1Q9Y3T6 440 aaKnown RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.61
BRD9-216ENST00000518251 EPN1Q9Y6I3 576 aaPredicted RBP11.27□□□□□ -0.61
BRD9-216ENST00000518251 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 USP27XA6NNY8 438 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 C5orf67F2Z3F1 127 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 SKIP12755 728 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 KCNE1P15382 129 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 POLR2BP30876 1174 aaKnown RBP11.26□□□□□ -0.61
BRD9-216ENST00000518251 ATICP31939 592 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 IRS1P35568 1242 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 LTBRP36941 435 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 USP8P40818 1118 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 KRT83P78385 493 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 GPM6BQ13491 265 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 CTC1Q2NKJ3 1217 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 ZNF667Q5HYK9 610 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 GLRA4Q5JXX5 417 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 ALKAL1Q6UXT8 129 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 IRF2BP2Q7Z5L9 587 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 VPS36Q86VN1 386 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 SEPT8Q92599 483 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 JAKMIP2Q96AA8 810 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 PPP1R13BQ96KQ4 1090 aa11.26□□□□□ -0.61
BRD9-216ENST00000518251 ZMAT2Q96NC0 199 aaKnown RBP11.26□□□□□ -0.61
BRD9-216ENST00000518251 IFIH1Q9BYX4 1025 aaKnown RBP11.26□□□□□ -0.61
BRD9-216ENST00000518251 CXCL16Q9H2A7 254 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms