RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TFAP2BQ92481 460 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 CELF4Q9BZC1 486 aaKnown RBP28.23■■■□□ 2.11
COL13A1-210ENST00000517713 ZNF518BQ9C0D4 1074 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 FAM153AQ9UHL3 310 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 MBLAC1A4D2B0 266 aaPredicted RBP28.23■■■□□ 2.11
COL13A1-210ENST00000517713 PROSCO94903 275 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 CYP2C9P11712 490 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 GRM5P41594 1212 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 CPT1AP50416 773 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 TERF2Q15554 542 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 DCAF4L1Q3SXM0 396 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 WHAMMQ8TF30 809 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 PARVAQ9NVD7 372 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 C2CD2Q9Y426 696 aa28.23■■■□□ 2.11
COL13A1-210ENST00000517713 SLC10A3P09131 477 aa28.22■■■□□ 2.11
COL13A1-210ENST00000517713 LACTBP83111 547 aaPredicted RBP28.22■■■□□ 2.11
COL13A1-210ENST00000517713 C1orf131Q8NDD1 294 aaKnown RBP28.22■■■□□ 2.11
COL13A1-210ENST00000517713 APBA2Q99767 749 aa28.22■■■□□ 2.11
COL13A1-210ENST00000517713 PLVAPQ9BX97 442 aa28.22■■■□□ 2.11
COL13A1-210ENST00000517713 VRTNQ9H8Y1 702 aa28.22■■■□□ 2.11
COL13A1-210ENST00000517713 ZFYVE28Q9HCC9 887 aa28.22■■■□□ 2.11
COL13A1-210ENST00000517713 GJD2Q9UKL4 321 aa28.22■■■□□ 2.11
COL13A1-210ENST00000517713 GOLGA6BA6NDN3 693 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 CALB1P05937 261 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 PSEN2P49810 448 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 CDH8P55286 799 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 DR1Q01658 176 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 SLC13A5Q86YT5 568 aaPredicted RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 TSEN2Q8NCE0 465 aaKnown RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 SOCS4Q8WXH5 440 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 AP5M1Q9H0R1 490 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 SDCBP2Q9H190 292 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 CDHR5Q9HBB8 845 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 UTP11Q9Y3A2 253 aaKnown RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 PHF2O75151 1096 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 NPTXRO95502 500 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 SYF2O95926 243 aaKnown RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 EIF4BP23588 611 aaKnown RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 POLR2BP30876 1174 aaKnown RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 HOXA11P31270 313 aaPredicted RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 CDH5P33151 784 aaPredicted RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 HLTFQ14527 1009 aaKnown RBP eCLIP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 RUFY4Q6ZNE9 571 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 CATSPER4Q7RTX7 472 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 APBB1IPQ7Z5R6 666 aaPredicted RBP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 NT5DC4Q86YG4 428 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 CD302Q8IX05 232 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 FEZF2Q8TBJ5 459 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.21■■■□□ 2.11
COL13A1-210ENST00000517713 ITGA11Q9UKX5 1188 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 AGAP1Q9UPQ3 857 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 Q9Y3F1 56 aa28.21■■■□□ 2.11
COL13A1-210ENST00000517713 HAS3O00219 553 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 TLR3O15455 904 aaKnown RBP28.2■■■□□ 2.11
COL13A1-210ENST00000517713 MYL3P08590 195 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 GGCXP38435 758 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 GUCY2FP51841 1108 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 DDX42Q86XP3 938 aaKnown RBP eCLIP28.2■■■□□ 2.11
COL13A1-210ENST00000517713 PRELID2Q8N945 189 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 SEC14L1Q92503 715 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 OSMRQ99650 979 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 SMYD3Q9H7B4 428 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 DPP3Q9NY33 737 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.2■■■□□ 2.11
COL13A1-210ENST00000517713 CEP83Q9Y592 693 aa28.2■■■□□ 2.11
COL13A1-210ENST00000517713 AGPSO00116 658 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 TNPO2O14787 897 aaKnown RBP28.19■■■□□ 2.1
COL13A1-210ENST00000517713 MED7O43513 233 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 PAEPP09466 180 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 P4HA1P13674 534 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 CHRNA3P32297 505 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 DHX34Q14147 1143 aaKnown RBP28.19■■■□□ 2.1
COL13A1-210ENST00000517713 HIC1Q14526 733 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 ZDHHC14Q8IZN3 488 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 WDTC1Q8N5D0 677 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.19■■■□□ 2.1
COL13A1-210ENST00000517713 HPDLQ96IR7 371 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 MTUS1Q9ULD2 1270 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 CD19P15391 556 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 ECHS1P30084 290 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 RAD23BP54727 409 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 ADAM17P78536 824 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 SLC27A1Q6PCB7 646 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 KIF12Q96FN5 646 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 RAB17Q9H0T7 212 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 CYP3A43Q9HB55 503 aa28.19■■■□□ 2.1
COL13A1-210ENST00000517713 FAM187AA6NFU0 413 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 DAPK3O43293 454 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 FAM193AP78312 1265 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 RBP5P82980 135 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 BEX3Q00994 111 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 PCBP1Q15365 356 aaKnown RBP eCLIP28.18■■■□□ 2.1
COL13A1-210ENST00000517713 ALS2CLQ60I27 953 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 MREGQ8N565 214 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 MAGOHBQ96A72 148 aaKnown RBP28.18■■■□□ 2.1
COL13A1-210ENST00000517713 VPS18Q9P253 973 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 TCRBV7S2A1N4TA0A589 114 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 IGHA2P01877 340 aa28.18■■■□□ 2.1
COL13A1-210ENST00000517713 DARSP14868 501 aaKnown RBP28.18■■■□□ 2.1
COL13A1-210ENST00000517713 DNAJB3Q8WWF6 145 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms