RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 TDRPQ86YL5 185 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 CPSF2Q9P2I0 782 aaKnown RBP13.07□□□□□ -0.32
PCM1-203ENST00000517545 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 C2orf71A6NGG8 1288 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
PCM1-203ENST00000517545 TBX10O75333 385 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 PROSCO94903 275 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 SLC1A1P43005 524 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 ARSEP51690 589 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 GAD2Q05329 585 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 GPS1Q13098 491 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 IRGCQ6NXR0 463 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 B3GNT9Q6UX72 402 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 RFX8Q6ZV50 586 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 ZC3H18Q86VM9 953 aaKnown RBP13.07□□□□□ -0.32
PCM1-203ENST00000517545 PASD1Q8IV76 773 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 GALNT15Q8N3T1 639 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 SH3TC2Q8TF17 1288 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 HAUS1Q96CS2 278 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 TEKT3Q9BXF9 490 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 HEY2Q9UBP5 337 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 SMAPO00193 183 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 ERFP50548 548 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 GPC3P51654 580 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 GMCL1P1Q8NEA9 526 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 IFT43Q96FT9 208 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 SLC17A7Q9P2U7 560 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 ZNF148Q9UQR1 794 aa13.07□□□□□ -0.32
PCM1-203ENST00000517545 PLSCR1O15162 318 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 GSC2O15499 205 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 BBOX1O75936 387 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 GH2P01242 217 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 POLR2MP0CAP2 368 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 CNGA1P29973 690 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 SLC18A1P54219 525 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 ABCB5Q2M3G0 1257 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 FYB2Q5VWT5 728 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 TMEM179Q6ZVK1 233 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 MFN1Q8IWA4 741 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 FBXL13Q8NEE6 735 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 PTCD3Q96EY7 689 aaKnown RBP13.06□□□□□ -0.32
PCM1-203ENST00000517545 BTBD10Q9BSF8 475 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 SAR1AQ9NR31 198 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 WDR35Q9P2L0 1181 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 LRCH1Q9Y2L9 728 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 SUGT1Q9Y2Z0 365 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 ZHX2Q9Y6X8 837 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
PCM1-203ENST00000517545 LMNAP02545 664 aaKnown RBP13.06□□□□□ -0.32
PCM1-203ENST00000517545 CRKP46108 304 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 RARRES1P49788 294 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 POLE2P56282 527 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 FAM196AQ6ZSG2 479 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 SV2AQ7L0J3 742 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCM1-203ENST00000517545 LRRC6Q86X45 466 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 COA1Q9GZY4 146 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 TMEM8AQ9HCN3 771 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 AVENQ9NQS1 362 aaPredicted RBP13.06□□□□□ -0.32
PCM1-203ENST00000517545 ANKFY1Q9P2R3 1169 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 PI4KBQ9UBF8 816 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 PMM2O15305 246 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 LIASO43766 372 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 CCDC22O60826 627 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 HAUS5O94927 633 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 ATF7P17544 494 aaPredicted RBP13.06□□□□□ -0.32
PCM1-203ENST00000517545 DSG3P32926 999 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 ECE1P42892 770 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 GPX6P59796 221 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 GTF2BQ00403 316 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 PDIA2Q13087 525 aaKnown RBP13.06□□□□□ -0.32
PCM1-203ENST00000517545 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 LRRC74BQ6ZQY2 392 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 TTC7BQ86TV6 843 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 KBTBD2Q8IY47 623 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 TCP10LQ8TDR4 215 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 PSMC3IPQ9P2W1 217 aaPredicted RBP13.06□□□□□ -0.32
PCM1-203ENST00000517545 COQ4Q9Y3A0 265 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 WASF2Q9Y6W5 498 aa13.06□□□□□ -0.32
PCM1-203ENST00000517545 A0A1B0GVG6 124 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 GYG2O15488 501 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 ZBED4O75132 1171 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 SERPINB3P29508 390 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 CETN2P41208 172 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 NSFP46459 744 aaKnown RBP13.05□□□□□ -0.32
PCM1-203ENST00000517545 MIER3Q7Z3K6 550 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 CCNJLQ8IV13 435 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 SCYL3Q8IZE3 742 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 ACSF2Q96CM8 615 aaPredicted RBP13.05□□□□□ -0.32
PCM1-203ENST00000517545 TTC25Q96NG3 672 aa13.05□□□□□ -0.32
PCM1-203ENST00000517545 VCXQ9H320 206 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms