RNA–Protein interactions for RNA: ENST00000515737.5

SH3BP2-228, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-228ENST00000515737 SPATA4Q8NEY3 305 aa18.01■□□□□ 0.47
SH3BP2-228ENST00000515737 C18orf25Q96B23 403 aaPredicted RBP18.01■□□□□ 0.47
SH3BP2-228ENST00000515737 PARD6BQ9BYG5 372 aa18.01■□□□□ 0.47
SH3BP2-228ENST00000515737 ANKZF1Q9H8Y5 726 aa18.01■□□□□ 0.47
SH3BP2-228ENST00000515737 CNTN3Q9P232 1028 aa18.01■□□□□ 0.47
SH3BP2-228ENST00000515737 UVRAGQ9P2Y5 699 aa18.01■□□□□ 0.47
SH3BP2-228ENST00000515737 RPS6KA5O75582 802 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 GNRH1P01148 92 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 RNASE9P60153 205 aaKnown RBP18■□□□□ 0.47
SH3BP2-228ENST00000515737 C2orf54Q08AI8 447 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 MESDQ14696 234 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 PTGISQ16647 500 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 ZNF572Q7Z3I7 529 aaPredicted RBP18■□□□□ 0.47
SH3BP2-228ENST00000515737 TFAP2BQ92481 460 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 TUBGCP4Q9UGJ1 667 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 IPPQ9Y573 584 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 TMEM110-MUSTN1A8MSY1 372 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 H2AFXP16104 143 aaPredicted RBP18■□□□□ 0.47
SH3BP2-228ENST00000515737 RRM1P23921 792 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 MON1BQ7L1V2 547 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 PHLDB2Q86SQ0 1253 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 BEST2Q8NFU1 509 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 PBKQ96KB5 322 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 CYP3A43Q9HB55 503 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
SH3BP2-228ENST00000515737 ADAM22Q9P0K1 906 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 ST3GAL5Q9UNP4 418 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 THSD7BQ9C0I4 1608 aa18■□□□□ 0.47
SH3BP2-228ENST00000515737 CD19P15391 556 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 THPOP40225 353 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 TNNC1P63316 161 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 MYO1EQ12965 1108 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 C11orf63Q6NUN7 778 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 SMG8Q8ND04 991 aaKnown RBP17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 TRIM11Q96F44 468 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 BTBD6Q96KE9 485 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 C11orf70Q9BRQ4 267 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 SENP6Q9GZR1 1112 aaPredicted RBP17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 SMIM28A0A1B0GU29 152 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 CES2O00748 559 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 PPEF2O14830 753 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 STAU1O95793 577 aaKnown RBP17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 MYBL1P10243 752 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 RAD23BP54727 409 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 ITIH3Q06033 890 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 ORC1Q13415 861 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 ITGA7Q13683 1181 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 SMYD5Q6GMV2 418 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 RPAINQ86UA6 219 aa17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 ZNF296Q8WUU4 475 aaPredicted RBP17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 AVENQ9NQS1 362 aaPredicted RBP17.99■□□□□ 0.47
SH3BP2-228ENST00000515737 CEP104O60308 925 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 FKTNO75072 461 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 INHAP05111 366 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 ACLYP53396 1101 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 LLGL2Q6P1M3 1020 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 PHF13Q86YI8 300 aaPredicted RBP17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 MSANTD4Q8NCY6 345 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 WHAMMQ8TF30 809 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 TWNKQ96RR1 684 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 SELENOOQ9BVL4 669 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 HMGXB4Q9UGU5 601 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 UBQLN1Q9UMX0 589 aaKnown RBP17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 PDCD11Q14690 1871 aaKnown RBP17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 CILPO75339 1184 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 RPLP2P05387 115 aaKnown RBP17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 MMS22LQ6ZRQ5 1243 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 VCPIP1Q96JH7 1222 aa17.98■□□□□ 0.47
SH3BP2-228ENST00000515737 TLR3O15455 904 aaKnown RBP17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 PAEPP09466 180 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 COMTP21964 271 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 MGAT3Q09327 533 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 LIN9Q5TKA1 542 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 SLC4A11Q8NBS3 891 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 TMEM35BQ8NCS4 154 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 ARRDC4Q8NCT1 418 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 PNKPQ96T60 521 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 TRMT13Q9NUP7 481 aaKnown RBP17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 ARGLU1Q9NWB6 273 aaPredicted RBP17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 ANAPC7Q9UJX3 599 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 PCDHGC3Q9UN70 934 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 DDX3YO15523 660 aaKnown RBP17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 CABYRO75952 493 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 CLCN6P51797 869 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 XKR4Q5GH76 650 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 PPP1R2P3Q6NXS1 205 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 C1orf131Q8NDD1 294 aaKnown RBP17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 TMEM176AQ96HP8 235 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 RPS6KC1Q96S38 1066 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 ELOVL4Q9GZR5 314 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 AGO3Q9H9G7 860 aaKnown RBP17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 BARX2Q9UMQ3 279 aaPredicted RBP17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
SH3BP2-228ENST00000515737 LSM8O95777 96 aaKnown RBP17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 KCNE1P15382 129 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 MMP8P22894 467 aa17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 PTPN11Q06124 597 aaPredicted RBP17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
SH3BP2-228ENST00000515737 PTP4A2Q12974 167 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms