RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 KRT4P19013 534 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 NOMO3P69849 1222 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 NFX1Q12986 1120 aaKnown RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 CRYMQ14894 314 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TAF11Q15544 211 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 MAPK6Q16659 721 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 WDR72Q3MJ13 1102 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TAF1BQ53T94 588 aaPredicted RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 GPD1LQ8N335 351 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 LRRN4Q8WUT4 740 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 MCEEQ96PE7 176 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 LRRC37BQ96QE4 947 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TBC1D10AQ9BXI6 508 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TRIM6Q9C030 488 aaPredicted RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 XPNPEP1Q9NQW7 623 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 LGALS13Q9UHV8 139 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 ICAM1P05362 532 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 CCND1P24385 295 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TUBP50607 506 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 POLGP54098 1239 aaPredicted RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 PSMC5P62195 406 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TFDP1Q14186 410 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 MTERF2Q49AM1 385 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 BRDTQ58F21 947 aaPredicted RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 LVRNQ6Q4G3 990 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 NLRX1Q86UT6 975 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 LONP2Q86WA8 852 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 RHOT1Q8IXI2 618 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 RFWD2Q8NHY2 731 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 FBF1Q8TES7 1133 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 ZNF526Q8TF50 670 aaPredicted RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 SLC7A6OSQ96CW6 309 aaPredicted RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 ZNF668Q96K58 619 aaPredicted RBP13.65□□□□□ -0.22
PHF3-212ENST00000515594 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 MFSD14AQ96MC6 490 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TMOD2Q9NZR1 351 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 NUB1Q9Y5A7 615 aa13.65□□□□□ -0.22
PHF3-212ENST00000515594 TCRBV7S3A2A0A539 114 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 ENO4A6NNW6 628 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 LIASO43766 372 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 PEX11AO75192 247 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 CCNB1P14635 433 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 MUTP22033 750 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 HIRAP54198 1017 aaPredicted RBP13.65□□□□□ -0.23
PHF3-212ENST00000515594 RAD23BP54727 409 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 ORC1Q13415 861 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 CCNG2Q16589 344 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 OTOAQ7RTW8 1153 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 MTDHQ86UE4 582 aaKnown RBP13.65□□□□□ -0.23
PHF3-212ENST00000515594 FNBP1Q96RU3 617 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.23
PHF3-212ENST00000515594 SLC17A7Q9P2U7 560 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.23
PHF3-212ENST00000515594 LRRD1A4D1F6 860 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 SGK1O00141 431 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 PEX10O60683 326 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 CENPCQ03188 943 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 MOGSQ13724 837 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 RNF43Q68DV7 783 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 ANKRD35Q8N283 1001 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 KCTD17Q8N5Z5 321 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 PTPRN2Q92932 1015 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 YIPF3Q9GZM5 350 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 HERC5Q9UII4 1024 aaKnown RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 CYP1A1P04798 512 aaPredicted RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 ACO1P21399 889 aaKnown RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 PTGER2P43116 358 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 GPX6P59796 221 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 ALCAMQ13740 583 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 STAT4Q14765 748 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 C4orf19Q8IY42 314 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 GBP7Q8N8V2 638 aaPredicted RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 LRRC8CQ8TDW0 803 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 DENND1AQ8TEH3 1009 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 WDR83Q9BRX9 315 aaKnown RBP13.64□□□□□ -0.23
PHF3-212ENST00000515594 WDR81Q562E7 1941 aa13.64□□□□□ -0.23
PHF3-212ENST00000515594 A0A0G2JND7 137 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 EME2A4GXA9 379 aaPredicted RBP13.63□□□□□ -0.23
PHF3-212ENST00000515594 GCKP35557 465 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 DLGAP5Q15398 846 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 PPP1R21Q6ZMI0 780 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 CCDC60Q8IWA6 550 aaPredicted RBP13.63□□□□□ -0.23
PHF3-212ENST00000515594 RBBP8NLQ8NC74 664 aaPredicted RBP13.63□□□□□ -0.23
PHF3-212ENST00000515594 CCDC77Q9BR77 488 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 ZWILCHQ9H900 591 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
PHF3-212ENST00000515594 LOXHD1Q8IVV2 1947 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 CCDC189A1A4V9 331 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 WDR64B1ANS9 1081 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 CD48P09326 243 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 LIG4P49917 911 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 GCNT1Q02742 428 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms