RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SLC5A9Q2M3M2 681 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 UVSSAQ2YD98 709 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 KIAA0895Q8NCT3 520 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 OR10T2Q8NGX3 314 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 ELMO3Q96BJ8 720 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 CCDC127Q96BQ5 260 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 TCEAL4Q96EI5 215 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 MCRS1Q96EZ8 462 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 ASIC4Q96FT7 647 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 RTP3Q9BQQ7 232 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 CORO1BQ9BR76 489 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 AFF4Q9UHB7 1163 aaKnown RBP12.41□□□□□ -0.42
VCAN-212ENST00000515397 SIX4Q9UIU6 781 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 SORCS3Q9UPU3 1222 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 PDCD11Q14690 1871 aaKnown RBP12.4□□□□□ -0.42
VCAN-212ENST00000515397 KPNA7A9QM74 516 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 HCRTO43612 131 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 PAPLNO95428 1278 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 LRG1P02750 347 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 RPN1P04843 607 aaKnown RBP12.4□□□□□ -0.42
VCAN-212ENST00000515397 RHOP08100 348 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 TMEM191BP0C7N4 346 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
VCAN-212ENST00000515397 GJA1P17302 382 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 TYMPP19971 482 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 CASP4P49662 377 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 SIGLEC14Q08ET2 396 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 KNOP1Q1ED39 458 aaKnown RBP12.4□□□□□ -0.42
VCAN-212ENST00000515397 PABPC1LQ4VXU2 614 aaKnown RBP12.4□□□□□ -0.42
VCAN-212ENST00000515397 PARM1Q6UWI2 310 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 CYP26C1Q6V0L0 522 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 KRBA2Q6ZNG9 492 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 LRRTM3Q86VH5 581 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 GPIHBP1Q8IV16 184 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 TCEAL8Q8IYN2 117 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 CXorf38Q8TB03 319 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
VCAN-212ENST00000515397 ERCC4Q92889 916 aaPredicted RBP12.4□□□□□ -0.42
VCAN-212ENST00000515397 FGF13Q92913 245 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 INTS13Q9NVM9 706 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 CEP72Q9P209 647 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 INSL5Q9Y5Q6 135 aa12.4□□□□□ -0.42
VCAN-212ENST00000515397 FAM237AA0A1B0GTK4 181 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 A0A1W2PQ27 194 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 A0A1W2PQ64 194 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 A0A1W2PQD8 194 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 ARHGEF37A1IGU5 675 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 CST3P01034 146 aaPredicted RBP12.39□□□□□ -0.43
VCAN-212ENST00000515397 CEBPBP17676 345 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 HOXA9P31269 272 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 CCR2P41597 374 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 NUCB2P80303 420 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 POU5F1Q01860 360 aaKnown RBP12.39□□□□□ -0.43
VCAN-212ENST00000515397 DPYDQ12882 1025 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 MTMR3Q13615 1198 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 SNRNP35Q16560 246 aaKnown RBP12.39□□□□□ -0.43
VCAN-212ENST00000515397 CCDC142Q17RM4 750 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 SLC39A12Q504Y0 691 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 IER5LQ5T953 404 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 TPGS2Q68CL5 300 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 SLC44A3Q8N4M1 653 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 XXYLT1Q8NBI6 393 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 PLEKHO2Q8TD55 490 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 ZNF516Q92618 1163 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 FGF14Q92915 247 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 ANKRD36BP1Q96IX9 119 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 RHOBTB2Q9BYZ6 727 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 TMLHEQ9NVH6 421 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.39□□□□□ -0.43
VCAN-212ENST00000515397 EPS15L1Q9UBC2 864 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 CDH7Q9ULB5 785 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 MRPS23Q9Y3D9 190 aaKnown RBP12.39□□□□□ -0.43
VCAN-212ENST00000515397 SNX9Q9Y5X1 595 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 NUMBLQ9Y6R0 609 aa12.39□□□□□ -0.43
VCAN-212ENST00000515397 ANK1P16157 1881 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 MUC6Q6W4X9 2439 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 MTMR11A4FU01 709 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 OR6C75A6NL08 312 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 EXOC3O60645 756 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 CFHP08603 1231 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 MYL4P12829 197 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 PTPN2P17706 415 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 TNNI1P19237 187 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 ACAT1P24752 427 aaKnown RBP12.38□□□□□ -0.43
VCAN-212ENST00000515397 RBP5P82980 135 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 CYP24A1Q07973 514 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 GPR17Q13304 367 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 PNOCQ13519 176 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 TDGQ13569 410 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 BMT2Q1RMZ1 405 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 SV2CQ496J9 727 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 CENPPQ6IPU0 288 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 HS2ST1Q7LGA3 356 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 METTL23Q86XA0 190 aa12.38□□□□□ -0.43
VCAN-212ENST00000515397 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms