RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	MICALCL	Q6ZW33	695 aa		5.42	□□□□□ -1.54
MATR3-223	ENST00000514402	ZNF575	Q86XF7	245 aa		5.42	□□□□□ -1.54
MATR3-223	ENST00000514402	FAM90A1	Q86YD7	464 aa		5.42	□□□□□ -1.54
MATR3-223	ENST00000514402	PDPR	Q8NCN5	879 aa		5.42	□□□□□ -1.54
MATR3-223	ENST00000514402	DDX17	Q92841	729 aa	Known RBP	5.42	□□□□□ -1.54
MATR3-223	ENST00000514402	IMPG2	Q9BZV3	1241 aa		5.42	□□□□□ -1.54
MATR3-223	ENST00000514402	KIAA0355	O15063	1070 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	ORC4	O43929	436 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	PEX1	O43933	1283 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	SUN1	O94901	812 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	TCF15	Q12870	199 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	KIF22	Q14807	665 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	VWA1	Q6PCB0	445 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	SLC17A8	Q8NDX2	589 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	SIMC1	Q8NDZ2	872 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	POC1B	Q8TC44	478 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	SNX19	Q92543	992 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	PGBD1	Q96JS3	809 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	PDLIM2	Q96JY6	352 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	CAMKK2	Q96RR4	588 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	TRIB1	Q96RU8	372 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	HEPH	Q9BQS7	1158 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	CNPPD1	Q9BV87	410 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	ALG13	Q9NP73	1137 aa	Known RBP	5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	COX11	Q9Y6N1	276 aa		5.41	□□□□□ -1.54
MATR3-223	ENST00000514402	TOR1B	O14657	336 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	ALDH1L1	O75891	902 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	ABLIM3	O94929	683 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	FTL	P02792	175 aa	Predicted RBP	5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	GJB1	P08034	283 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	PDGFRB	P09619	1106 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	RARB	P10826	455 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	CLK3	P49761	638 aa	Known RBP	5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	RARRES1	P49788	294 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	ELL	P55199	621 aa	Predicted RBP	5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	PTPRR	Q15256	657 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	PREPL	Q4J6C6	727 aa	Predicted RBP	5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	TAPT1	Q6NXT6	567 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	HEATR3	Q7Z4Q2	680 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	ADGRG3	Q86Y34	549 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	ADGRG5	Q8IZF4	528 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	ACTRT2	Q8TDY3	377 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	TMEM125	Q96AQ2	219 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	DUSP26	Q9BV47	211 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	AASDHPPT	Q9NRN7	309 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	DDX56	Q9NY93	547 aa	Known RBP	5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	FOXJ2	Q9P0K8	574 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	ABCF2	Q9UG63	623 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	TLK1	Q9UKI8	766 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402	SLC45A2	Q9UMX9	530 aa		5.4	□□□□□ -1.54
MATR3-223	ENST00000514402		E9PLN8	166 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	POLRMT	O00411	1230 aa	Known RBP	5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	YY2	O15391	372 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	GNAI2	P04899	355 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	TYR	P14679	529 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	CACNA2D1	P54289	1103 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	SIM1	P81133	766 aa	Predicted RBP	5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	ITIH3	Q06033	890 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	HABP2	Q14520	560 aa	Predicted RBP	5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	SF3B3	Q15393	1217 aa	Known RBP	5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	ATAT1	Q5SQI0	421 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	HOOK2	Q96ED9	719 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	MVB12A	Q96EY5	273 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	OSBPL9	Q96SU4	736 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	VKORC1	Q9BQB6	163 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	GTPBP4	Q9BZE4	634 aa	Known RBP	5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	MRPL46	Q9H2W6	279 aa	Known RBP	5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	LMBRD1	Q9NUN5	540 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	VSX1	Q9NZR4	365 aa	Predicted RBP	5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	PCDHA3	Q9Y5H8	950 aa		5.39	□□□□□ -1.55
MATR3-223	ENST00000514402	LRRC14B	A6NHZ5	514 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	ZNF785	A8K8V0	405 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	MATN4	O95460	622 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	LPO	P22079	712 aa	Predicted RBP	5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	GATA3	P23771	443 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	MAP2K6	P52564	334 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	NXPH1	P58417	271 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	PIN1	Q13526	163 aa	Predicted RBP	5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	TTF1	Q15361	905 aa	Predicted RBP	5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	EMC10	Q5UCC4	262 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	BRIX1	Q8TDN6	353 aa	Known RBP	5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	HPS3	Q969F9	1004 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	C1GALT1C1	Q96EU7	318 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	CDK5RAP3	Q96JB5	506 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	MAP3K14	Q99558	947 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	PNPO	Q9NVS9	261 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	ETAA1	Q9NY74	926 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	SLC17A6	Q9P2U8	582 aa		5.38	□□□□□ -1.55
MATR3-223	ENST00000514402	PRSS29P	A6NIE9	313 aa		5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	TRIAP1	O43715	76 aa		5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	OFD1	O75665	1012 aa		5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	CT47B1	P0C2W7	299 aa	Predicted RBP	5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	PF4V1	P10720	104 aa		5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	NPTX2	P47972	431 aa		5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	ZNF135	P52742	658 aa	Predicted RBP	5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	EPHB1	P54762	984 aa		5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	NKX6-1	P78426	367 aa	Predicted RBP	5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	MCL1	Q07820	350 aa		5.37	□□□□□ -1.55
MATR3-223	ENST00000514402	CD300E	Q496F6	205 aa	Predicted RBP	5.37	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms