RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 TOP3BO95985 862 aaKnown RBP13.18□□□□□ -0.3
PTPN20-229ENST00000513756 EDN1P05305 212 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 CYP11B2P19099 503 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 TXKP42681 527 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 MCM2P49736 904 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-229ENST00000513756 STXBP5Q5T5C0 1151 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 GPR158Q5T848 1215 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 ITIH5Q86UX2 942 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 SLC32A1Q9H598 525 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 TUFT1Q9NNX1 390 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 EBF1Q9UH73 591 aa13.18□□□□□ -0.3
PTPN20-229ENST00000513756 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-229ENST00000513756 GCN1Q92616 2671 aaKnown RBP13.17□□□□□ -0.3
PTPN20-229ENST00000513756 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 K7ERI5 159 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 RNF40O75150 1001 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 CDC45O75419 566 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 APBB3O95704 486 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 DRD1P21728 446 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 RDXP35241 583 aaKnown RBP13.17□□□□□ -0.3
PTPN20-229ENST00000513756 OSTNP61366 133 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 YWHAHQ04917 246 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-229ENST00000513756 DUSP4Q13115 394 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 TOB2Q14106 344 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-229ENST00000513756 FBXO43Q4G163 708 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 FSTL4Q6MZW2 842 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 GAREM2Q75VX8 874 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 PSMG2Q969U7 264 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 ZMAT2Q96NC0 199 aaKnown RBP13.17□□□□□ -0.3
PTPN20-229ENST00000513756 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 MKNK1Q9BUB5 465 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 DNAJC25Q9H1X3 360 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 TASP1Q9H6P5 420 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 CNTN3Q9P232 1028 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 ZMYM5Q9UJ78 669 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 EML5Q05BV3 1969 aa13.17□□□□□ -0.3
PTPN20-229ENST00000513756 SETXQ7Z333 2677 aaKnown RBP13.17□□□□□ -0.3
PTPN20-229ENST00000513756 OR6C75A6NL08 312 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 NEMFO60524 1076 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 OAZ2O95190 189 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 SPATA31C1P0DKV0 1188 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 GABRR2P28476 465 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 GBP1P32455 592 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 STK3Q13188 491 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 GPR17Q13304 367 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 RUNX3Q13761 415 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 UAP1L1Q3KQV9 507 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 ZNF568Q3ZCX4 644 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 EARS2Q5JPH6 523 aaKnown RBP13.16□□□□□ -0.3
PTPN20-229ENST00000513756 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 DNAJB7Q7Z6W7 309 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-229ENST00000513756 USP37Q86T82 979 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 KIFAP3Q92845 792 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 C18orf25Q96B23 403 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-229ENST00000513756 PGLYRP2Q96PD5 576 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 ACO2Q99798 780 aaKnown RBP13.16□□□□□ -0.3
PTPN20-229ENST00000513756 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 LAMA5O15230 3695 aa13.16□□□□□ -0.3
PTPN20-229ENST00000513756 KIF26AQ9ULI4 1882 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-229ENST00000513756 PHLPP2Q6ZVD8 1323 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 CDX4O14627 284 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-229ENST00000513756 DCLK1O15075 740 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 PRAMEF12O95522 483 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 EGFP01133 1207 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 CDC25CP30307 473 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 KRT2P35908 639 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 LMAN2Q12907 356 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
PTPN20-229ENST00000513756 KIAA1211LQ6NV74 962 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 SYT13Q7L8C5 426 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 CATSPER3Q86XQ3 398 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 CEP120Q8N960 986 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 DEFB124Q8NES8 71 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 ACDQ96AP0 544 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 POLR3CQ9BUI4 534 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-229ENST00000513756 MRPL4Q9BYD3 311 aaKnown RBP13.15□□□□□ -0.3
PTPN20-229ENST00000513756 CDT1Q9H211 546 aa13.15□□□□□ -0.3
PTPN20-229ENST00000513756 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 ATG2BQ96BY7 2078 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 NUP205Q92621 2012 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 M0QZQ0 153 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-229ENST00000513756 VNN2O95498 520 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 OR4Q2P0C623 313 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 MCF2P10911 925 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 DGKEP52429 567 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 MYBPC2Q14324 1141 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 DMC1Q14565 340 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 VEPH1Q14D04 833 aa13.14□□□□□ -0.31
PTPN20-229ENST00000513756 PMS2CLQ68D20 193 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms