RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	GUCY2F	P51841	1108 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	TWF1	Q12792	350 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	FAM78A	Q5JUQ0	283 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CCDC73	Q6ZRK6	1079 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DNASE1L2	Q92874	299 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SMARCD2	Q92925	531 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CLDN23	Q96B33	292 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ZFP14	Q9HCL3	533 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DSE	Q9UL01	958 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	EXOC7	Q9UPT5	735 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ASB3	Q9Y575	518 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PCDHB13	Q9Y5F0	798 aa		13.6	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DCHS1	Q96JQ0	3298 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ANK1	P16157	1881 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	NRG2	O14511	850 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	IL18RAP	O95256	599 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	NFIC	P08651	508 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ODC1	P11926	461 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	PDIA4	P13667	645 aa	Known RBP	13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	NASP	P49321	788 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MLLT6	P55198	1093 aa	Predicted RBP	13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SMARCB1	Q12824	385 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DUSP4	Q13115	394 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ALCAM	Q13740	583 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ZNF528	Q3MIS6	628 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	L1TD1	Q5T7N2	865 aa	Known RBP	13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ARMCX5	Q6P1M9	558 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	FAM173B	Q6P4H8	233 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MAMSTR	Q6ZN01	415 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DYM	Q7RTS9	669 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	SFR1	Q86XK3	245 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	HS6ST3	Q8IZP7	471 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	E2F7	Q96AV8	911 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ZSWIM3	Q96MP5	696 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	USP28	Q96RU2	1077 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	FOXQ1	Q9C009	403 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	CRISPLD1	Q9H336	500 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	MRPL44	Q9H9J2	332 aa	Known RBP	13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	ASAH2	Q9NR71	780 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	DPP3	Q9NY33	737 aa		13.59	□□□□□ -0.23
UBE2D3-231	ENST00000513098	FANCM	Q8IYD8	2048 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	SHISA7	A6NL88	538 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	FAM170B	A6NMN3	283 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	TISP43	B9A030	160 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	STX6	O43752	255 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	LDHA	P00338	332 aa	Known RBP	13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	PSMC3	P17980	439 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	GART	P22102	1010 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	WEE1	P30291	646 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	RPS9	P46781	194 aa	Known RBP	13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	ALDH1A3	P47895	512 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	EPHB3	P54753	998 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	KCNA1	Q09470	495 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	FZD5	Q13467	585 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	ZNF852	Q6ZMS4	543 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	TMC8	Q8IU68	726 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	MFSD6L	Q8IWD5	586 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	ZNF687	Q8N1G0	1237 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	LINC00301	Q8NCQ3	95 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	C2orf15	Q8WU43	125 aa	Known RBP	13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	DEPDC1B	Q8WUY9	529 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	POMGNT1	Q8WZA1	660 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	IRF7	Q92985	503 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	FAM212A	Q96EL1	285 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	ACCS	Q96QU6	501 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	TRMT61B	Q9BVS5	477 aa	Known RBP	13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	BCO2	Q9BYV7	579 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	DNAJC25	Q9H1X3	360 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	LTB4R2	Q9NPC1	389 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	FBXO4	Q9UKT5	387 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	MTF2	Q9Y483	593 aa	Predicted RBP	13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	YIPF1	Q9Y548	306 aa		13.58	□□□□□ -0.24
UBE2D3-231	ENST00000513098	OTOGL	Q3ZCN5	2332 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098		A0A087X0B3	334 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	MTMR11	A4FU01	709 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098		K7ELQ4	463 aa	Predicted RBP	13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	MAN2B1	O00754	1011 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	NCAM2	O15394	837 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	PPP6R2	O75170	966 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	FGF19	O95750	216 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	OR4Q2	P0C623	313 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	SP9	P0CG40	484 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	TUFM	P49411	452 aa	Known RBP	13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	TAF6	P49848	677 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	CEBPZ	Q03701	1054 aa	Known RBP	13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	ATAD1	Q8NBU5	361 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	OR10T2	Q8NGX3	314 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	SHKBP1	Q8TBC3	707 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	SNX21	Q969T3	373 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	PSMG2	Q969U7	264 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	PGLYRP2	Q96PD5	576 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	ZCWPW1	Q9H0M4	648 aa		13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	MRPS17	Q9Y2R5	130 aa	Known RBP	13.57	□□□□□ -0.24
UBE2D3-231	ENST00000513098	MIA3	Q5JRA6	1907 aa		13.56	□□□□□ -0.24
UBE2D3-231	ENST00000513098	DMXL1	Q9Y485	3027 aa		13.56	□□□□□ -0.24
UBE2D3-231	ENST00000513098	KPNA7	A9QM74	516 aa		13.56	□□□□□ -0.24
UBE2D3-231	ENST00000513098	CYB561D2	O14569	222 aa		13.56	□□□□□ -0.24
UBE2D3-231	ENST00000513098	LRRN2	O75325	713 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms