RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	SLC45A2	Q9UMX9	530 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	GTF2A1L	Q9UNN4	478 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
CAST-238	ENST00000512620	SLC4A7	Q9Y6M7	1214 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	KIAA1107	Q9UPP5	1409 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	ITSN2	Q9NZM3	1697 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	CEP170	Q5SW79	1584 aa		4.19	□□□□□ -1.74
CAST-238	ENST00000512620	RAD54L2	Q9Y4B4	1467 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	LAMC1	P11047	1609 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	TRPM1	Q7Z4N2	1603 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	PARD3	Q8TEW0	1356 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	EPRS	P07814	1512 aa	Known RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	TOPBP1	Q92547	1522 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	NRP1	O14786	923 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	MTSS1	O43312	755 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	NCK2	O43639	380 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	RRP9	O43818	475 aa	Known RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	PIP5K1C	O60331	668 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	IL2RB	P14784	551 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	HOXA5	P20719	270 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	SLC6A4	P31645	630 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	CASP5	P51878	434 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	SUMO3	P55854	103 aa	Predicted RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	SOX8	P57073	446 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	NOMO3	P69849	1222 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	CAP1	Q01518	475 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	SP140	Q13342	867 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	NFYC	Q13952	458 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	CNGB1	Q14028	1251 aa	Predicted RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	TRIM14	Q14142	442 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	GAGE13	Q4V321	117 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	ALF	Q53S48	1182 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	FAM47A	Q5JRC9	791 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	IZUMO3	Q5VZ72	239 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	CCDC70	Q6NSX1	233 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	FAM124A	Q86V42	546 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	FAM90A1	Q86YD7	464 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	PLXDC1	Q8IUK5	500 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	FEZF2	Q8TBJ5	459 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	BRIX1	Q8TDN6	353 aa	Known RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	RABGGTA	Q92696	567 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	PHACTR3	Q96KR7	559 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	OR14A2	Q96R54	314 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	LMF1	Q96S06	567 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	TCF25	Q9BQ70	676 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	UNK	Q9C0B0	810 aa	Known RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	WDR12	Q9GZL7	423 aa	Known RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	ENKD1	Q9H0I2	346 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	MRPL46	Q9H2W6	279 aa	Known RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	ZNF287	Q9HBT7	754 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	SARS2	Q9NP81	518 aa	Known RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	USP40	Q9NVE5	1235 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	MOCS1	Q9NZB8	636 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.18	□□□□□ -1.74
CAST-238	ENST00000512620	CALCOCO1	Q9P1Z2	691 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	PNMA2	Q9UL42	364 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	OGDHL	Q9ULD0	1010 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	OAZ3	Q9UMX2	235 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	DUSP10	Q9Y6W6	482 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	ABCC5	O15440	1437 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	PNPLA7	Q6ZV29	1317 aa		4.18	□□□□□ -1.74
CAST-238	ENST00000512620	WDR62	O43379	1518 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	CLASP1	Q7Z460	1538 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	ZNF608	Q9ULD9	1512 aa	Predicted RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	ISM1	B1AKI9	464 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620		F8W8V4	182 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	TRIM13	O60858	407 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	HSP90AA1	P07900	732 aa	Known RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	CR2	P20023	1033 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	SLC6A2	P23975	617 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	PPM1A	P35813	382 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	GRK6	P43250	576 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	STT3A	P46977	705 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	KCNJ5	P48544	419 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	PIK3CG	P48736	1102 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	FLT3LG	P49771	235 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	PSMC1	P62191	440 aa	Known RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	KIAA2012	Q0VF49	1180 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	MRPL49	Q13405	166 aa	Known RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	CCDC93	Q567U6	631 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	C3orf38	Q5JPI3	329 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	KLHDC7A	Q5VTJ3	777 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	DBX2	Q6ZNG2	339 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	ARHGEF18	Q6ZSZ5	1173 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	PDZD4	Q76G19	769 aa	Predicted RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	TAX1BP1	Q86VP1	789 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	SESTD1	Q86VW0	696 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	TMEM151B	Q8IW70	566 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	NKAP	Q8N5F7	415 aa	Known RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	CASKIN2	Q8WXE0	1202 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	SUCLG2	Q96I99	432 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	MRGPRX1	Q96LB2	322 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	PLA2G12B	Q9BX93	195 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	PNN	Q9H307	717 aa	Known RBP	4.17	□□□□□ -1.74
CAST-238	ENST00000512620	WDCP	Q9H6R7	721 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	SPON1	Q9HCB6	807 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	SACM1L	Q9NTJ5	587 aa		4.17	□□□□□ -1.74
CAST-238	ENST00000512620	FBXO34	Q9NWN3	711 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms