RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 TMEM229AB2RXF0 380 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 ZNF263O14978 683 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 HNRNPDLO14979 420 aaKnown RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 SLC16A4O15374 487 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 BUB1O43683 1085 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 PALMO75781 387 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 ERLIN2O94905 339 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 TMEM253P0C7T8 217 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 FAM228BP0C875 321 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 TXNP10599 105 aaKnown RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 SELPP16109 830 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 KCNA2P16389 499 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 ACTR2P61160 394 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 TFF2Q03403 129 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 SMC1AQ14683 1233 aaKnown RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 AGERQ15109 404 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 SURF1Q15526 300 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 SNRNP35Q16560 246 aaKnown RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 MEI1Q5TIA1 1274 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 SWSAP1Q6NVH7 229 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 CNKSR3Q6P9H4 555 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 MICALL1Q8N3F8 863 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 UBL4BQ8N7F7 174 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 LRRN4CLQ8ND94 238 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 SPATA4Q8NEY3 305 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 CCDC26Q8TAB7 109 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 RFFLQ8WZ73 363 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 DHX38Q92620 1227 aaKnown RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 KCNN1Q92952 543 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 TRIM11Q96F44 468 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 RUNDC3BQ96NL0 473 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 HINFPQ9BQA5 517 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 ANKZF1Q9H8Y5 726 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 MLXIPQ9HAP2 919 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 UBE2TQ9NPD8 197 aaPredicted RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 ZNF358Q9NW07 568 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 CAPN6Q9Y6Q1 641 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 SCN5AQ14524 2016 aa10.17□□□□□ -0.78
MSH3-203ENST00000512531 TCF20Q9UGU0 1960 aaKnown RBP10.17□□□□□ -0.78
MSH3-203ENST00000512531 PIEZO1Q92508 2521 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 BRWD1Q9NSI6 2320 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 A0A0U1RQJ8 604 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 EPOPA6NHQ4 379 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 A6NNZ2 444 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 MIF4GDA9UHW6 222 aaKnown RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 ZBTB39O15060 712 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 OPA1O60313 960 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 LPXNO60711 386 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 GH1P01241 217 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 MATR3P43243 847 aaKnown RBP eCLIP10.16□□□□□ -0.78
MSH3-203ENST00000512531 NAMPTP43490 491 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 NPTX2P47972 431 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 SLC26A2P50443 739 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 PDE6CP51160 858 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 KCNQ1P51787 676 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 EFNA5P52803 228 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 ERVK-21P61565 698 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 WDR5P61964 334 aaKnown RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 PRKCEQ02156 737 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 APBA1Q02410 837 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 USP4Q13107 963 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 PAK2Q13177 524 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 NNTQ13423 1086 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 PTGISQ16647 500 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 TUBB8Q3ZCM7 444 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 UTP14CQ5TAP6 766 aaKnown RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 EMBQ6PCB8 327 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 ZNF571Q7Z3V5 609 aaPredicted RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 MAATS1Q7Z4T9 603 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 ZNF677Q86XU0 584 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 DHX37Q8IY37 1157 aaKnown RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 DAW1Q8N136 415 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 EIF1ADQ8N9N8 165 aaKnown RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 TMEM161BQ8NDZ6 487 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 FBXL13Q8NEE6 735 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 FAM71BQ8TC56 605 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 ATRIPQ8WXE1 791 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 ARNTL2Q8WYA1 636 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 MMS19Q96T76 1030 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 RAD9AQ99638 391 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 KATNAL1Q9BW62 490 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 IMPG2Q9BZV3 1241 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 C2orf40Q9H1Z8 148 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 C1orf112Q9NSG2 853 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 FAM53CQ9NYF3 392 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 SUCLA2Q9P2R7 463 aaPredicted RBP10.16□□□□□ -0.78
MSH3-203ENST00000512531 HDAC6Q9UBN7 1215 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 LCMT1Q9UIC8 334 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 HCN4Q9Y3Q4 1203 aa10.16□□□□□ -0.78
MSH3-203ENST00000512531 NCANO14594 1321 aa10.15□□□□□ -0.78
MSH3-203ENST00000512531 PGRMC1O00264 195 aaKnown RBP10.15□□□□□ -0.78
MSH3-203ENST00000512531 RFXAPO00287 272 aa10.15□□□□□ -0.78
MSH3-203ENST00000512531 NOP56O00567 594 aaKnown RBP10.15□□□□□ -0.78
MSH3-203ENST00000512531 EXTL3O43909 919 aa10.15□□□□□ -0.78
MSH3-203ENST00000512531 ATP9AO75110 1047 aa10.15□□□□□ -0.78
MSH3-203ENST00000512531 RTN2O75298 545 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms