RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 PPP2R5AQ15172 486 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 PADI6Q6TGC4 694 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 LRSAM1Q6UWE0 723 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
DDR1-267ENST00000512336 CATSPER3Q86XQ3 398 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 APPL2Q8NEU8 664 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
DDR1-267ENST00000512336 LHX6Q9UPM6 363 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 TNFSF13BQ9Y275 285 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 LOC400499M0QZD8 3231 aa13.35□□□□□ -0.27
DDR1-267ENST00000512336 SMG1Q96Q15 3661 aaKnown RBP13.35□□□□□ -0.27
DDR1-267ENST00000512336 ARHGEF35A5YM69 484 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 DCLK1O15075 740 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 CAVIN2O95810 425 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 KCNE1P15382 129 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 KRT2P35908 639 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 EPHB3P54753 998 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 CREB5Q02930 508 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 DUSP4Q13115 394 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 PLD1Q13393 1074 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 ITPRIPL2Q3MIP1 535 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 ZNF568Q3ZCX4 644 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 DAB2IPQ5VWQ8 1189 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 FSTL4Q6MZW2 842 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 GAREM2Q75VX8 874 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 BPIFB1Q8TDL5 484 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 ZCCHC14Q8WYQ9 949 aaKnown RBP13.34□□□□□ -0.27
DDR1-267ENST00000512336 TNFRSF25Q93038 417 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 IFT74Q96LB3 600 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 SCNM1Q9BWG6 230 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 ATXN3LQ9H3M9 355 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 STK36Q9NRP7 1315 aa13.34□□□□□ -0.27
DDR1-267ENST00000512336 LNP1A1A4G5 178 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 MEFVO15553 781 aaPredicted RBP13.33□□□□□ -0.28
DDR1-267ENST00000512336 ATG13O75143 517 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 CDKL5O76039 1030 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 GABRR2P28476 465 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 MARCKSP29966 332 aaPredicted RBP13.33□□□□□ -0.28
DDR1-267ENST00000512336 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 SCRN1Q12765 414 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 ELF2Q15723 593 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 TMEM196Q5HYL7 178 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 TMEM130Q8N3G9 435 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.28
DDR1-267ENST00000512336 PTPRHQ9HD43 1115 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 CNTN3Q9P232 1028 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
DDR1-267ENST00000512336 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
DDR1-267ENST00000512336 EML5Q05BV3 1969 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 NUP210Q8TEM1 1887 aaPredicted RBP13.32□□□□□ -0.28
DDR1-267ENST00000512336 KIF26AQ9ULI4 1882 aaPredicted RBP13.32□□□□□ -0.28
DDR1-267ENST00000512336 BCLAF3A2AJT9 711 aaKnown RBP13.32□□□□□ -0.28
DDR1-267ENST00000512336 K7ERI5 159 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 RNF40O75150 1001 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 SOAT2O75908 522 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 EGFP01133 1207 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 CEACAM1P13688 526 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 MCM2P49736 904 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 CYP4F8P98187 520 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 YWHAHQ04917 246 aaPredicted RBP13.32□□□□□ -0.28
DDR1-267ENST00000512336 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
DDR1-267ENST00000512336 KIAA1211LQ6NV74 962 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 DNAJB7Q7Z6W7 309 aaPredicted RBP13.32□□□□□ -0.28
DDR1-267ENST00000512336 CAMKK1Q8N5S9 505 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 CHFRQ96EP1 664 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 ACAP3Q96P50 834 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
DDR1-267ENST00000512336 TMEM60Q9H2L4 133 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 TUBGCP4Q9UGJ1 667 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 TPCN1Q9ULQ1 816 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
DDR1-267ENST00000512336 HARSP12081 509 aaKnown RBP13.31□□□□□ -0.28
DDR1-267ENST00000512336 CSRP1P21291 193 aaKnown RBP13.31□□□□□ -0.28
DDR1-267ENST00000512336 GPR17Q13304 367 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 KARSQ15046 597 aaKnown RBP13.31□□□□□ -0.28
DDR1-267ENST00000512336 PTPAQ15257 358 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 ARHGAP15Q53QZ3 475 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 CENPPQ6IPU0 288 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 TTC9BQ8N6N2 239 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 ATAD1Q8NBU5 361 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 PSMG2Q969U7 264 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 POLR3CQ9BUI4 534 aaPredicted RBP13.31□□□□□ -0.28
DDR1-267ENST00000512336 TARS2Q9BW92 718 aaKnown RBP13.31□□□□□ -0.28
DDR1-267ENST00000512336 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 BRMS1Q9HCU9 246 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 TMEM9BQ9NQ34 198 aa13.31□□□□□ -0.28
DDR1-267ENST00000512336 HPS4Q9NQG7 708 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms