RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ZSWIM2Q8NEG5 633 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 ZNF461Q8TAF7 563 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 ITFG1Q8TB96 612 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 SLC7A14Q8TBB6 771 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 STAMQ92783 540 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 SYAP1Q96A49 352 aaPredicted RBP6.33□□□□□ -1.4
RNF4-217ENST00000511892 MSTO1Q9BUK6 570 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 RPP25Q9BUL9 199 aaKnown RBP6.33□□□□□ -1.4
RNF4-217ENST00000511892 FGFBP2Q9BYJ0 223 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 PANK2Q9BZ23 570 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 RPF1Q9H9Y2 349 aaKnown RBP6.33□□□□□ -1.4
RNF4-217ENST00000511892 LMBRD1Q9NUN5 540 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.33□□□□□ -1.4
RNF4-217ENST00000511892 IGSF9Q9P2J2 1179 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 TFIP11Q9UBB9 837 aaKnown RBP6.33□□□□□ -1.4
RNF4-217ENST00000511892 DNMT3BQ9UBC3 853 aaKnown RBP6.33□□□□□ -1.4
RNF4-217ENST00000511892 CCDC39Q9UFE4 941 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 FBXL5Q9UKA1 691 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 AGO2Q9UKV8 859 aaKnown RBP6.33□□□□□ -1.4
RNF4-217ENST00000511892 NUB1Q9Y5A7 615 aa6.33□□□□□ -1.4
RNF4-217ENST00000511892 FAM186AA6NE01 2351 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 DMXL1Q9Y485 3027 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 MYH10P35580 1976 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 PIRO00625 290 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 SPTLC1O15269 473 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 PPP6R2O75170 966 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 OAZ2O95190 189 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 NFICP08651 508 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 ATF2P15336 505 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 FSHRP23945 695 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 WNT7BP56706 349 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 LILRA4P59901 499 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 PPP2R3AQ06190 1150 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 PKP1Q13835 747 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 STK38Q15208 465 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 KYAT1Q16773 422 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 SLC5A9Q2M3M2 681 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 FOXD4L5Q5VV16 416 aaPredicted RBP6.32□□□□□ -1.4
RNF4-217ENST00000511892 SPATA1Q5VX52 437 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 C9orf57Q5W0N0 161 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 CWF19L1Q69YN2 538 aaKnown RBP6.32□□□□□ -1.4
RNF4-217ENST00000511892 ATL3Q6DD88 541 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 ADALQ6DHV7 355 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 PARM1Q6UWI2 310 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 CCDC73Q6ZRK6 1079 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 RTL10Q7L3V2 364 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 CD302Q8IX05 232 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 TCEAL8Q8IYN2 117 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 FOXD4L4Q8WXT5 416 aaPredicted RBP6.32□□□□□ -1.4
RNF4-217ENST00000511892 FGF13Q92913 245 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 FGF14Q92915 247 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 NXPE3Q969Y0 559 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 TSPAN18Q96SJ8 248 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 PHOX2BQ99453 314 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 MRPL44Q9H9J2 332 aaKnown RBP6.32□□□□□ -1.4
RNF4-217ENST00000511892 CYP4F11Q9HBI6 524 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 AVENQ9NQS1 362 aaPredicted RBP6.32□□□□□ -1.4
RNF4-217ENST00000511892 TBC1D7Q9P0N9 293 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 SEL1LQ9UBV2 794 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 CDH7Q9ULB5 785 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 UBQLN1Q9UMX0 589 aaKnown RBP6.32□□□□□ -1.4
RNF4-217ENST00000511892 POLIQ9UNA4 740 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 TIMM13Q9Y5L4 95 aaPredicted RBP6.32□□□□□ -1.4
RNF4-217ENST00000511892 NUMBLQ9Y6R0 609 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 DCHS1Q96JQ0 3298 aa6.32□□□□□ -1.4
RNF4-217ENST00000511892 ATG2BQ96BY7 2078 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 ANO9A1A5B4 782 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 KRBA1A5PL33 1030 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 GOLGA6L3A6NEY3 463 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 H7C4K7 107 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 SPTLC2O15270 562 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 PI15O43692 258 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 XYLBO75191 536 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 YEATS4O95619 227 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 RHOP08100 348 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 CFHP08603 1231 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 OR4Q2P0C623 313 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 SRFP11831 508 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 GAP43P17677 238 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 ABCD1P33897 745 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 HOXD13P35453 343 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 TXLNAP40222 546 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 CCR2P41597 374 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 STAT6P42226 847 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 CLCN5P51795 746 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 ARPP19P56211 112 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 YWHAHQ04917 246 aaPredicted RBP6.31□□□□□ -1.4
RNF4-217ENST00000511892 ADCY1Q08828 1119 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 TMEM132DQ14C87 1099 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 PABPC1LQ4VXU2 614 aaKnown RBP6.31□□□□□ -1.4
RNF4-217ENST00000511892 PRSS36Q5K4E3 855 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 TPGS2Q68CL5 300 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 SCARA3Q6AZY7 606 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 SLFN12LQ6IEE8 588 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 ZNF280DQ6N043 979 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 SHC4Q6S5L8 630 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 RNF19BQ6ZMZ0 732 aa6.31□□□□□ -1.4
RNF4-217ENST00000511892 ALYREFQ86V81 257 aaKnown RBP6.31□□□□□ -1.4
RNF4-217ENST00000511892 NPAS3Q8IXF0 933 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms