RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MCEEQ96PE7 176 aa15.84■□□□□ 0.13
PHF3-209ENST00000509330 HERPUD2Q9BSE4 406 aa15.84■□□□□ 0.13
PHF3-209ENST00000509330 SLC5A4Q9NY91 659 aa15.84■□□□□ 0.13
PHF3-209ENST00000509330 KLK14Q9P0G3 267 aa15.84■□□□□ 0.13
PHF3-209ENST00000509330 PPEF2O14830 753 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 AP3M2P53677 418 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 DR1Q01658 176 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 DNAJC21Q5F1R6 531 aaKnown RBP15.83■□□□□ 0.12
PHF3-209ENST00000509330 LIN9Q5TKA1 542 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 DENND1BQ6P3S1 775 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 PRELID2Q8N945 189 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 TMEM40Q8WWA1 233 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 ADPGKQ9BRR6 497 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 WNT8AQ9H1J5 351 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 ABT1Q9ULW3 272 aaKnown RBP15.83■□□□□ 0.12
PHF3-209ENST00000509330 PI4K2BG5E9Z4 385 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 CCDC188H7C350 402 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 ZNF865P0CJ78 1059 aaPredicted RBP15.83■□□□□ 0.12
PHF3-209ENST00000509330 CTGFP29279 349 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 CTNNA1P35221 906 aaKnown RBP15.83■□□□□ 0.12
PHF3-209ENST00000509330 RWDD2BP57060 319 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 TAS2R40P59535 323 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 CRHR2Q13324 411 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 TMEM132DQ14C87 1099 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 SURF1Q15526 300 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 TTC27Q6P3X3 843 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 SESTD1Q86VW0 696 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 ACAP3Q96P50 834 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 RPS6KC1Q96S38 1066 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 GNEQ9Y223 722 aaKnown RBP15.83■□□□□ 0.12
PHF3-209ENST00000509330 SNX24Q9Y343 169 aa15.83■□□□□ 0.12
PHF3-209ENST00000509330 MYADML2A6NDP7 307 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 KRT14P02533 472 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 MCF2P10911 925 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 ZNF132P52740 706 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 MFSD10Q14728 455 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 RGMBQ6NW40 437 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 CCDC26Q8TAB7 109 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 ACBD3Q9H3P7 528 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 NXF3Q9H4D5 531 aaKnown RBP15.82■□□□□ 0.12
PHF3-209ENST00000509330 PCDHA3Q9Y5H8 950 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 MTA2O94776 668 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 KCTD16Q68DU8 428 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 EMBQ6PCB8 327 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 IFNL1Q8IU54 200 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 UBR7Q8N806 425 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 OR2W6PQ8NHA6 318 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 HPDLQ96IR7 371 aa15.82■□□□□ 0.12
PHF3-209ENST00000509330 TRIM6Q9C030 488 aaPredicted RBP15.82■□□□□ 0.12
PHF3-209ENST00000509330 CCDC66A2RUB6 948 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 C6orf222P0C671 652 aaPredicted RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 RARAP10276 462 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 ECHS1P30084 290 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 DCUN1D2Q6PH85 259 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 MAATS1Q7Z4T9 603 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 WDTC1Q8N5D0 677 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 C18orf25Q96B23 403 aaPredicted RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 RNF25Q96BH1 459 aaPredicted RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 NFKBIZQ9BYH8 718 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 CENPHQ9H3R5 247 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 PIN4Q9Y237 131 aaKnown RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 UTP11Q9Y3A2 253 aaKnown RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 A6NJR5 290 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 IL18RAPO95256 599 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 PTP4A2Q12974 167 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 TRIP13Q15645 432 aaPredicted RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 KAZNQ674X7 775 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 SLC13A5Q86YT5 568 aaPredicted RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 CCDC105Q8IYK2 499 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 UBA3Q8TBC4 463 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 ZMAT2Q96NC0 199 aaKnown RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 ZIM3Q96PE6 472 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 RUFY1Q96T51 708 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 FAM204AQ9H8W3 233 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 TUBGCP4Q9UGJ1 667 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 CYTH4Q9UIA0 394 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 ADAM21Q9UKJ8 722 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 A0A1B0GUA9 196 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 F8VP50 259 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 HCRTO43612 131 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 HOXA11P31270 313 aaPredicted RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 CCDC137Q6PK04 289 aaKnown RBP15.81■□□□□ 0.12
PHF3-209ENST00000509330 SYNCQ9H7C4 482 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 DPP3Q9NY33 737 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 CNTN6Q9UQ52 1028 aa15.81■□□□□ 0.12
PHF3-209ENST00000509330 F2P00734 622 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 PSMC4P43686 418 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 LMAN1P49257 510 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 VPS41P49754 854 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 GABPB1Q06547 395 aaPredicted RBP15.8■□□□□ 0.12
PHF3-209ENST00000509330 FAM187BQ17R55 369 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 DNAJC24Q6P3W2 148 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 ERICH1Q86X53 443 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 EMC1Q8N766 993 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 C12orf29Q8N999 325 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 NAP1L3Q99457 506 aaPredicted RBP15.8■□□□□ 0.12
PHF3-209ENST00000509330 LPIN3Q9BQK8 851 aa15.8■□□□□ 0.12
PHF3-209ENST00000509330 ELOVL4Q9GZR5 314 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms