RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 PROKR1Q8TCW9 393 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 PHACTR3Q96KR7 559 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 MRGPRX4Q96LA9 322 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 PRRX2Q99811 253 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 PCDHB1Q9Y5F3 818 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 CROCC2H7BZ55 1655 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 CAMSAP2Q08AD1 1489 aa5.39□□□□□ -1.55
NFKB1-208ENST00000509165 ASXL1Q8IXJ9 1541 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 UNC13BO14795 1591 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 GRID2IPA4D2P6 1211 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 NDUFA10O95299 355 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 SPATA31D3P0C874 917 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 TGFB2P61812 414 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 TSHZ3Q63HK5 1081 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 B3GNTL1Q67FW5 361 aaPredicted RBP5.38□□□□□ -1.55
NFKB1-208ENST00000509165 SPATA31D4Q6ZUB0 917 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 MIGA2Q7L4E1 593 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 VRK3Q8IV63 474 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 STAG1Q8WVM7 1258 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 KAT5Q92993 513 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 CHFRQ96EP1 664 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 IKZF4Q9H2S9 585 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 TDP1Q9NUW8 608 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.38□□□□□ -1.55
NFKB1-208ENST00000509165 FPGT-TNNI3KV9GXZ4 949 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 DHX29Q7Z478 1369 aaKnown RBP5.38□□□□□ -1.55
NFKB1-208ENST00000509165 PLEKHH2Q8IVE3 1493 aa5.38□□□□□ -1.55
NFKB1-208ENST00000509165 PIK3C2BO00750 1634 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 TCRBV7S2A1N4TA0A589 114 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 FOXN1O15353 648 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 SBK3P0C264 359 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 IBSPP21815 317 aaPredicted RBP5.37□□□□□ -1.55
NFKB1-208ENST00000509165 RECQLP46063 649 aaPredicted RBP5.37□□□□□ -1.55
NFKB1-208ENST00000509165 EXOSC10Q01780 885 aaKnown RBP5.37□□□□□ -1.55
NFKB1-208ENST00000509165 DSC2Q02487 901 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 OCA2Q04671 838 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 TMEM240Q5SV17 173 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 KCNV1Q6PIU1 500 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 CMTR2Q8IYT2 770 aaKnown RBP5.37□□□□□ -1.55
NFKB1-208ENST00000509165 CPEB3Q8NE35 698 aaKnown RBP5.37□□□□□ -1.55
NFKB1-208ENST00000509165 NSUN6Q8TEA1 469 aaKnown RBP5.37□□□□□ -1.55
NFKB1-208ENST00000509165 TMX3Q96JJ7 454 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 C11orf54Q9H0W9 315 aaPredicted RBP5.37□□□□□ -1.55
NFKB1-208ENST00000509165 GSTO2Q9H4Y5 243 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 ATP11BQ9Y2G3 1177 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 MAP3K2Q9Y2U5 619 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 MTUS2Q5JR59 1369 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 TMEM2Q9UHN6 1383 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 MYOM3Q5VTT5 1437 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 MROH1Q8NDA8 1641 aa5.37□□□□□ -1.55
NFKB1-208ENST00000509165 A0A1B0GTW7 788 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 ZEB1P37275 1124 aaPredicted RBP5.36□□□□□ -1.55
NFKB1-208ENST00000509165 INHBCP55103 352 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 ZNF280AP59817 542 aaPredicted RBP5.36□□□□□ -1.55
NFKB1-208ENST00000509165 TLE1Q04724 770 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 SLFN5Q08AF3 891 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 SCAPQ12770 1279 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 RAB39AQ14964 217 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 MRGPRGQ86SM5 289 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 MAPKAPK5Q8IW41 473 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 TMEM132CQ8N3T6 1108 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 FUBP1Q96AE4 644 aaKnown RBP5.36□□□□□ -1.55
NFKB1-208ENST00000509165 ZSWIM1Q9BR11 485 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 SERHL2Q9H4I8 314 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 TYW1Q9NV66 732 aaKnown RBP5.36□□□□□ -1.55
NFKB1-208ENST00000509165 ANKFY1Q9P2R3 1169 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 CEP152O94986 1710 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 SPHKAPQ2M3C7 1700 aa5.36□□□□□ -1.55
NFKB1-208ENST00000509165 PTPN23Q9H3S7 1636 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 RALGAPBQ86X10 1494 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 SPDEFO95238 335 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 CKBP12277 381 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 ALAS1P13196 640 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 FGFR4P22455 802 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 PROZP22891 400 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 CCND1P24385 295 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 DDX6P26196 483 aaKnown RBP eCLIP5.35□□□□□ -1.55
NFKB1-208ENST00000509165 NEK2P51955 445 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 NOMO3P69849 1222 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 COL10A1Q03692 680 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 RESTQ13127 1097 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 PTPAQ15257 358 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 UAP1L1Q3KQV9 507 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 FLYWCH1Q4VC44 716 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 NOMO2Q5JPE7 1267 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 LAIR1Q6GTX8 287 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 RSPH3Q86UC2 560 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 PRR18Q8N4B5 295 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 CPA6Q8N4T0 437 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 FITM2Q8N6M3 262 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 IL17RDQ8NFM7 739 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 LRRC59Q96AG4 307 aaKnown RBP5.35□□□□□ -1.55
NFKB1-208ENST00000509165 CHMP4CQ96CF2 233 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 CEP89Q96ST8 783 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 WDR11Q9BZH6 1224 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 RNPEPQ9H4A4 650 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 TCF7L1Q9HCS4 588 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 SYBUQ9NX95 663 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 CALCOCO1Q9P1Z2 691 aa5.35□□□□□ -1.55
NFKB1-208ENST00000509165 USP25Q9UHP3 1055 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms