RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 LMNB1P20700 586 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 FDFT1P37268 417 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 ENTPD1P49961 510 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 NCKAP1LP55160 1127 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 JAM2P57087 298 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 KRT17Q04695 432 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 ZBTB17Q13105 803 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 SNAPC2Q13487 334 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 METTL21CQ5VZV1 264 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 SNRNP48Q6IEG0 339 aaKnown RBP10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 LVRNQ6Q4G3 990 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 DYMQ7RTS9 669 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 TDRPQ86YL5 185 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 LZTR1Q8N653 840 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 RBM15BQ8NDT2 890 aaKnown RBP10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 ZSWIM1Q9BR11 485 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 PRDM11Q9NQV5 511 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 SH3GLB2Q9NR46 395 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 ATAD3AQ9NVI7 634 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 ADAMTS6Q9UKP5 1117 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 PADI4Q9UM07 663 aa10.56□□□□□ -0.72
PDGFRA-207ENST00000509092 A0A088AWK7 358 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 H3BSA7 217 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 CASQ2O14958 399 aaPredicted RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 PRKAB2O43741 272 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ATP6V1B1P15313 513 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 PMLP29590 882 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 PIK3CAP42336 1068 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 KCNJ1P48048 391 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 CPA2P48052 419 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ERFP50548 548 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 CDK9P50750 372 aaKnown RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 NUP107P57740 925 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 OVGP1Q12889 678 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 DLGAP5Q15398 846 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 TLR1Q15399 786 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 C11orf63Q6NUN7 778 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 TMEM214Q6NUQ4 689 aaKnown RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 RNF111Q6ZNA4 994 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 DCDC5Q6ZRR9 648 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 PRUNE1Q86TP1 453 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 RELL1Q8IUW5 271 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 GLIS3Q8NEA6 775 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 OLIG1Q8TAK6 271 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 RASGRP4Q8TDF6 673 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 OXNAD1Q96HP4 312 aaPredicted RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 CLPTM1LQ96KA5 538 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 NSMCE3Q96MG7 304 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 THTPAQ9BU02 230 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 KIAA1586Q9HCI6 787 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 BLOC1S4Q9NUP1 217 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ASIC3Q9UHC3 531 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 IQCA1LA6NCM1 817 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 SOBPA7XYQ1 873 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ITM2AO43736 263 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 TYROBPO43914 113 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 SORBS3O60504 671 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ZBED4O75132 1171 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 TGDSO95455 350 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 STT3AP46977 705 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 EIF2B2P49770 351 aaKnown RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ITGA8P53708 1063 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 HADHBP55084 474 aaKnown RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 CREB5Q02930 508 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 IFIT5Q13325 482 aaKnown RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 NONOQ15233 471 aaKnown RBP eCLIP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 RASA2Q15283 850 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 SIX1Q15475 284 aaPredicted RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 C6orf183Q5T699 404 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 NIPAL1Q6NVV3 410 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ELMSAN1Q6PJG2 1045 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 SYDE1Q6ZW31 735 aaPredicted RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ANO5Q75V66 913 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 SLC13A5Q86YT5 568 aaPredicted RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ZC3H3Q8IXZ2 948 aaKnown RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 KRT35Q92764 455 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 DDX12PQ92771 950 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 EME1Q96AY2 570 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 LRRC19Q9H756 370 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 KCNK13Q9HB14 408 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 ALG6Q9Y672 507 aa10.55□□□□□ -0.72
PDGFRA-207ENST00000509092 CNOT3O75175 753 aaKnown RBP10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 CSDE1O75534 798 aaKnown RBP10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 FUCA1P04066 466 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 VEGFAP15692 232 aaPredicted RBP10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 ABCB4P21439 1286 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 CDH3P22223 829 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 PON1P27169 355 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 GCAP28676 217 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 HIRAP54198 1017 aaPredicted RBP10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 BTKQ06187 659 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 PTK6Q13882 451 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 SEPT6Q14141 434 aa10.54□□□□□ -0.72
PDGFRA-207ENST00000509092 IL23RQ5VWK5 629 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms