RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 SUGP1Q8IWZ8 645 aaKnown RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 ZNF713Q8N859 430 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 ST13P5Q8NFI4 369 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 DBF4BQ8NFT6 615 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 EXOC6Q8TAG9 804 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 BTN2A2Q8WVV5 523 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 TBC1D5Q92609 795 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 MRPL38Q96DV4 380 aaKnown RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 CCDC120Q96HB5 630 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 FCRL2Q96LA5 508 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 CCDC43Q96MW1 224 aaKnown RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 FCRL3Q96P31 734 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 MAP7D2Q96T17 732 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 MAP3K14Q99558 947 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 SENP7Q9BQF6 1050 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 MTA3Q9BTC8 594 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 MCMBPQ9BTE3 642 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 CCDC113Q9H0I3 377 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 FAM49AQ9H0Q0 323 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 LMAN2LQ9H0V9 348 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 NSUN3Q9H649 340 aaKnown RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 ZSWIM4Q9H7M6 989 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 UBE2ZQ9H832 354 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 C6orf50Q9HD87 102 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 SETD4Q9NVD3 440 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 C19orf73Q9NVV2 129 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 EBF1Q9UH73 591 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 ADGRE2Q9UHX3 823 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 MAD2L2Q9UI95 211 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 TUBE1Q9UJT0 475 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 PCDHB7Q9Y5E2 793 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 PARP14Q460N5 1801 aa4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 GREB1LQ9C091 1923 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P11-201ENST00000508668 MCM3APO60318 1980 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 BRCA2P51587 3418 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 LINC01553A4QN01 128 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 C2orf71A6NGG8 1288 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 GOLGA8AA7E2F4 631 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 GOLGA8BA8MQT2 603 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 CPLX1O14810 134 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 AURKAO14965 403 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 CXCL10P02778 98 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 CYP21A2P08686 494 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 GHRP10912 638 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 RAC2P15153 192 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 XBP1P17861 261 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 POU3F3P20264 500 aaPredicted RBP4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 ENDOUP21128 410 aaKnown RBP4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 PTGS1P23219 599 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 CHMLP26374 656 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 PSMA5P28066 241 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 GDNFP39905 211 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 SEPHS1P49903 392 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 DNM2P50570 870 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 IRAK1P51617 712 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 STAT5BP51692 787 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 PPP2R2AP63151 447 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 DEFB103AP81534 67 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 SCRN1Q12765 414 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 PKN1Q16512 942 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 EPC2Q52LR7 807 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 MCTP1Q6DN14 999 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 USP17L6PQ6QN14 398 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 DPH6Q7L8W6 267 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 TEX2Q8IWB9 1127 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 THNSL1Q8IYQ7 743 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 NME8Q8N427 588 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 METTL13Q8N6R0 699 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 FANCBQ8NB91 859 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 CCDC148Q8NFR7 591 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 MRGPRX3Q96LB0 322 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 NEK1Q96PY6 1258 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 GPR20Q99678 358 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 C17orf80Q9BSJ5 609 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 SPZ1Q9BXG8 430 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 IRF2BPLQ9H1B7 796 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 SLKQ9H2G2 1235 aaPredicted RBP4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 RNPEPQ9H4A4 650 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 RIOX1Q9H6W3 641 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 NRBP2Q9NSY0 501 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 ERVK13-1Q9NX77 482 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 SLC9A2Q9UBY0 812 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 CTNND2Q9UQB3 1225 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 RBM8AQ9Y5S9 174 aaKnown RBP4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 BACE2Q9Y5Z0 518 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 RANBP2P49792 3224 aaKnown RBP4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 LRRC37A2A6NM11 1700 aa4.24□□□□□ -1.73
HMGN1P11-201ENST00000508668 SALL3Q9BXA9 1300 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 A0A1W2PQU0 124 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 SMCO2A6NFE2 343 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 H3BNC9 293 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 H3BQ06 376 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 DDX39AO00148 427 aaKnown RBP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 FOXP2O15409 715 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 DCXO43602 365 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 DKC1O60832 514 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 NBNO60934 754 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 RPS6KA5O75582 802 aa4.23□□□□□ -1.73
HMGN1P11-201ENST00000508668 REC8O95072 547 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms