RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 BROXQ5VW32 411 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 PGBD2Q6P3X8 592 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 NPNTQ6UXI9 565 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 ARHGAP36Q6ZRI8 547 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 EP400NLQ6ZTU2 488 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 RFX8Q6ZV50 586 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 DDX53Q86TM3 631 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 SGMS1Q86VZ5 419 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 VSIG1Q86XK7 387 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 COL23A1Q86Y22 540 aaPredicted RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 NLGN4XQ8N0W4 816 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 IGSF22Q8N9C0 903 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 ZNF527Q8NB42 609 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 CCDC191Q8NCU4 936 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 STON2Q8WXE9 905 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 PHKBQ93100 1093 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 TMEM41AQ96HV5 264 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 BAG1Q99933 345 aaPredicted RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 ADPGKQ9BRR6 497 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 ALG1Q9BT22 464 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 LRFN3Q9BTN0 628 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 SORBS1Q9BX66 1292 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 ZDHHC5Q9C0B5 715 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 MAGEH1Q9H213 219 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 OLA1Q9NTK5 396 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 IRAK4Q9NWZ3 460 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 H2AFY2Q9P0M6 372 aaPredicted RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 HERC5Q9UII4 1024 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 SOS1Q07889 1333 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 C17orf113A0A1B0GUU1 675 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 RHPN2P1A8MT19 583 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 B4DLN1 442 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 F5H0A9 414 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ARHGAP6O43182 974 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 TGM5O43548 720 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ZBED4O75132 1171 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 MAFO75444 373 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 HSPA4LO95757 839 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 HMGCRP04035 888 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 SLC3A2P08195 630 aaKnown RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ATP6V1B1P15313 513 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 PDE6AP16499 860 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 PTPN1P18031 435 aaKnown RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ACRV1P26436 265 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 MSX2P35548 267 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ATP6V1E1P36543 226 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 KPNA1P52294 538 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 INHBCP55103 352 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 CDC16Q13042 620 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 PRKG1Q13976 671 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ASIC2Q16515 512 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 TTC31Q49AM3 519 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ARMC4Q5T2S8 1044 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 GALNT17Q6IS24 598 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 STYK1Q6J9G0 422 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 JMJD6Q6NYC1 403 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 USP30Q70CQ3 517 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 IQCA1Q86XH1 822 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 DENND1CQ8IV53 801 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 TRMT2AQ8IZ69 625 aaKnown RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 AMER2Q8N7J2 671 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 LMBR1Q8WVP7 490 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 C1GALT1C1Q96EU7 318 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 SLX1AQ9BQ83 275 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 KIAA1683Q9H0B3 1180 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 CCDC68Q9H2F9 335 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 GHITMQ9H3K2 345 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 MMRN2Q9H8L6 949 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 TLR9Q9NR96 1032 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 CATSPERZQ9NTU4 200 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 PLA2G3Q9NZ20 509 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 B4GALT6Q9UBX8 382 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 CFDP1Q9UEE9 299 aaPredicted RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 ITGB1BP2Q9UKP3 347 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 CORO2BQ9UQ03 480 aa4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 RRP15Q9Y3B9 282 aaKnown RBP4.84□□□□□ -1.63
SMARCA5-202ENST00000508573 PGPEP1LA6NFU8 196 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 GOLGA8AA7E2F4 631 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 GOLGA8BA8MQT2 603 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 RPL17P18621 184 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 C5AR1P21730 350 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 CD86P42081 329 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 ETV4P43268 484 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 TNNT3P45378 269 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 PDE6CP51160 858 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 NAP1L1P55209 391 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 OCRLQ01968 901 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 HHEXQ03014 270 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 ZNF543Q08ER8 600 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 DUSP8Q13202 625 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 TUBA3CQ13748 450 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 KRT32Q14532 448 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 CNN3Q15417 329 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 FNDC7Q5VTL7 733 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 CREB3L3Q68CJ9 461 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 TATDN1Q6P1N9 297 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 TUBA3EQ6PEY2 450 aa4.83□□□□□ -1.64
SMARCA5-202ENST00000508573 FAM47EQ6ZV65 393 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms