RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 DDX23Q9BUQ8 820 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MRIQ9BWK5 157 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 STRA6Q9BX79 667 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KLF16Q9BXK1 252 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 FRMD8P1Q9BZ68 369 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TMX4Q9H1E5 349 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRABDQ9H4I3 376 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 TLE6Q9H808 572 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZFAND3Q9H8U3 227 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MRPL47Q9HD33 250 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PGPEP1Q9NXJ5 209 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PI4KBQ9UBF8 816 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SRP68Q9UHB9 627 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 LNPEPQ9UIQ6 1025 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 KCNG1Q9UIX4 513 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 PHTF1Q9UMS5 762 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 NAALADL1Q9UQQ1 740 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MRPL11Q9Y3B7 192 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 SCINQ9Y6U3 715 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZHX2Q9Y6X8 837 aa5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 AHDC1Q5TGY3 1603 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P16-201ENST00000508037 MROH7Q68CQ1 1323 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF335Q9H4Z2 1342 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 LOXHD1Q8IVV2 1947 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 IGLV3-22A0A075B6J6 115 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SFI1A8K8P3 1242 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 A8MXQ7 604 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANKRD63C9JTQ0 380 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 H0YCG3 227 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 IPO5O00410 1097 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 EML1O00423 815 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 C2CD2LO14523 706 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 TM9SF1O15321 606 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 NVLO15381 856 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ECE2O60344 883 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCDC22O60826 627 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 EDF1O60869 148 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PROSCO94903 275 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 LYPLA2O95372 231 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SGPL1O95470 568 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 BMP3P12645 472 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PLS3P13797 630 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 CHRNB2P17787 502 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 KRT15P19012 456 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 GNAZP19086 355 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ATP4AP20648 1035 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 IVDP26440 423 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 HOXA10P31260 410 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 VHLP40337 213 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MAGEA4P43358 317 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 NSFP46459 744 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 KCNJ1P48048 391 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 GCLMP48507 274 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MARCKSL1P49006 195 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 CTCFP49711 727 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 GTF2IP78347 998 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 FMO1Q01740 532 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 GCNT1Q02742 428 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PPARDQ03181 441 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MCL1Q07820 350 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 KCNA1Q09470 495 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 DYNC1I2Q13409 638 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MORF4L2Q15014 288 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 TMED2Q15363 201 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ABCB5Q2M3G0 1257 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MUM1Q2TAK8 710 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 KLHL38Q2WGJ6 581 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 CEP55Q53EZ4 464 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 EAPPQ56P03 285 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 WDR44Q5JSH3 913 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 NAIF1Q69YI7 327 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 AADACL2Q6P093 401 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCDC62Q6P9F0 684 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 DRICH1Q6PGQ1 229 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC30A9Q6PML9 568 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 CENPUQ71F23 418 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 NIPA1Q7RTP0 329 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 GSTA5Q7RTV2 222 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MIER3Q7Z3K6 550 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANKS1BQ7Z6G8 1248 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 NOP9Q86U38 636 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRABD2AQ86V40 505 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SESTD1Q86VW0 696 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 LONP2Q86WA8 852 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ARHGEF19Q8IW93 802 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM42Q8IWZ5 723 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SP8Q8IXZ3 490 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 RCOR2Q8IZ40 523 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PPM1KQ8N3J5 372 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SMC1BQ8NDV3 1235 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 FBXL13Q8NEE6 735 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 EXD1Q8NHP7 514 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ASAP3Q8TDY4 903 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF483Q8TF39 744 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZFAND2BQ8WV99 257 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 C1orf54Q8WWF1 131 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 STMN2Q93045 179 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 DTNBP1Q96EV8 351 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 RMDN2Q96LZ7 410 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms