RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 DDX27Q96GQ7 796 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 TMEM169Q96HH4 297 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 SENP8Q96LD8 212 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 LPIN3Q9BQK8 851 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 SDCBP2Q9H190 292 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 NDST4Q9H3R1 872 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 LIMA1Q9UHB6 759 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 ITGA11Q9UKX5 1188 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 SNX9Q9Y5X1 595 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 KIAA1671Q9BY89 1806 aa9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 PDCD11Q14690 1871 aaKnown RBP9.5□□□□□ -0.89
SCAMP1-202ENST00000506858 HIDE1A8MVS5 230 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 CYB561D2O14569 222 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 ADAM12O43184 909 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 LPXNO60711 386 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 CALCAP01258 141 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 WEE2P0C1S8 567 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 EEF1GP26641 437 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 TAF6P49848 677 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 MCCD1P59942 119 aaPredicted RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 FANCCQ00597 558 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 KCNMA1Q12791 1236 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 ORC1Q13415 861 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 WDR72Q3MJ13 1102 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 PLPP4Q5VZY2 271 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 WSCD1Q658N2 575 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 RSPO2Q6UXX9 243 aaPredicted RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 RRAGAQ7L523 313 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 OSTM1Q86WC4 334 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 NT5DC4Q86YG4 428 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 ARHGEF19Q8IW93 802 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 LMO3Q8TAP4 145 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 UROC1Q96N76 676 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 MMS19Q96T76 1030 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 ARID3AQ99856 593 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 MRPL45Q9BRJ2 306 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 INTS2Q9H0H0 1204 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 SMYD3Q9H7B4 428 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 RAB20Q9NX57 234 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 AJAP1Q9UKB5 411 aaPredicted RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 R3HCC1Q9Y3T6 440 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 NME7Q9Y5B8 376 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 RALGAPA2Q2PPJ7 1873 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 KPNA7A9QM74 516 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 EFEMP2O95967 443 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 SERPINC1P01008 464 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 ACAT1P24752 427 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 GTF2H1P32780 548 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 ADGRE1Q14246 886 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 SOWAHAQ2M3V2 549 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 ZNF699Q32M78 642 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 USP37Q86T82 979 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 EHBP1Q8NDI1 1231 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 FBXL13Q8NEE6 735 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 MICAL1Q8TDZ2 1067 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 RIN2Q8WYP3 895 aaPredicted RBP9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 TMEM209Q96SK2 561 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 IFNKQ9P0W0 207 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 L1RE1Q9UN81 338 aa9.49□□□□□ -0.89
SCAMP1-202ENST00000506858 H3BNC9 293 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 PER2O15055 1255 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 EPHB6O15197 1021 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 CXCL14O95715 111 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 ASS1P00966 412 aaKnown RBP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 PDGFRBP09619 1106 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 OR4Q2P0C623 313 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 CD58P19256 250 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 LMO2P25791 158 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 PON1P27169 355 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 GTF2F1P35269 517 aaKnown RBP eCLIP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 AARSP49588 968 aaKnown RBP eCLIP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 AP3M2P53677 418 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 ARPP19P56211 112 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 NOP14P78316 857 aaKnown RBP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 RBM10P98175 930 aaKnown RBP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 PLCB3Q01970 1234 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 UBXN1Q04323 297 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 KRT17Q04695 432 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 SYCP1Q15431 976 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 SGSM1Q2NKQ1 1148 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 ADGRD2Q7Z7M1 963 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 RBM23Q86U06 439 aaKnown RBP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 PDCL2Q8N4E4 241 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 LRRC52Q8N7C0 313 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 SUSD3Q96L08 255 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 TSPAN18Q96SJ8 248 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 TCF25Q9BQ70 676 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 RTP3Q9BQQ7 232 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 LSM14BQ9BX40 385 aaKnown RBP9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 SIX2Q9NPC8 291 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 GCNT4Q9P109 453 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 COQ4Q9Y3A0 265 aa9.48□□□□□ -0.89
SCAMP1-202ENST00000506858 LRRC10BA6NIK2 292 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 LGALS16A8MUM7 142 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 C5orf67F2Z3F1 127 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 TMEM189-UBE2V1I3L0A0 370 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms