RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 RSPO2Q6UXX9 243 aaPredicted RBP11.64□□□□□ -0.55
CPNE4-206ENST00000505957 STXBP4Q6ZWJ1 553 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 MTSS1LQ765P7 747 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 GPR161Q8N6U8 529 aaKnown RBP11.64□□□□□ -0.55
CPNE4-206ENST00000505957 FGF14Q92915 247 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 IQCDQ96DY2 449 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 CPB2Q96IY4 423 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 B3GALT6Q96L58 329 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 CNOT6LQ96LI5 555 aaKnown RBP11.64□□□□□ -0.55
CPNE4-206ENST00000505957 RPP25Q9BUL9 199 aaKnown RBP11.64□□□□□ -0.55
CPNE4-206ENST00000505957 STRA6Q9BX79 667 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 BCO2Q9BYV7 579 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 FOXQ1Q9C009 403 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 TRIM6Q9C030 488 aaPredicted RBP11.64□□□□□ -0.55
CPNE4-206ENST00000505957 ST6GALNAC4Q9H4F1 302 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 RRAGDQ9NQL2 400 aaPredicted RBP11.64□□□□□ -0.55
CPNE4-206ENST00000505957 XPNPEP1Q9NQW7 623 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 SPTLC3Q9NUV7 552 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 FBXW11Q9UKB1 542 aa11.64□□□□□ -0.55
CPNE4-206ENST00000505957 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 SF3B1O75533 1304 aaKnown RBP eCLIP11.63□□□□□ -0.55
CPNE4-206ENST00000505957 GPR179Q6PRD1 2367 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 INO80B-WBP1J3KQ70 363 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 N4BP3O15049 544 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 TADA2AO75478 443 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 PPP1R37O75864 691 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 ARF4P18085 180 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-206ENST00000505957 PFKPQ01813 784 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 HSP90AA2PQ14568 343 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-206ENST00000505957 MLF2Q15773 248 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-206ENST00000505957 KNOP1Q1ED39 458 aaKnown RBP11.63□□□□□ -0.55
CPNE4-206ENST00000505957 SLC44A4Q53GD3 710 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 SLC27A1Q6PCB7 646 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 PADI6Q6TGC4 694 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 RTL10Q7L3V2 364 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 DCLK2Q8N568 766 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 GLIS3Q8NEA6 775 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 PIK3R5Q8WYR1 880 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 FGFBP2Q9BYJ0 223 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 NXF3Q9H4D5 531 aaKnown RBP11.63□□□□□ -0.55
CPNE4-206ENST00000505957 C17orf75Q9HAS0 396 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 PCDHGA2Q9Y5H1 932 aa11.63□□□□□ -0.55
CPNE4-206ENST00000505957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.63□□□□□ -0.55
CPNE4-206ENST00000505957 DNAH14Q0VDD8 3507 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 CACNA1IQ9P0X4 2223 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 ZBTB39O15060 712 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 SLC16A3O15427 465 aaKnown RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 TEX33O43247 280 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 LAMTOR5O43504 91 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 CALUO43852 315 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 DGAT1O75907 488 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 RPL17P18621 184 aaKnown RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 SCP2P22307 547 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 FECHP22830 423 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 AKAP5P24588 427 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 ARL2P36404 184 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 SNRPFP62306 86 aaKnown RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 PPP2R3AQ06190 1150 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 MYBPC2Q14324 1141 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 RSPO4Q2I0M5 234 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 HSP90AA4PQ58FG1 418 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 FIGNQ5HY92 759 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 RTP2Q5QGT7 225 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 VARS2Q5ST30 1063 aaKnown RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 LIN9Q5TKA1 542 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 PDXDC1Q6P996 788 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 ZNF720Q7Z2F6 126 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 GRASPQ7Z6J2 395 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 GLYCTKQ8IVS8 523 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 DAW1Q8N136 415 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 GOLGA5Q8TBA6 731 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 LNX1Q8TBB1 728 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 FGF13Q92913 245 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 ERGIC2Q96RQ1 377 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 NELL2Q99435 816 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 CLSTN3Q9BQT9 956 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 TUBGCP2Q9BSJ2 902 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 TTPALQ9BTX7 342 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 APOL6Q9BWW8 343 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 MRPL44Q9H9J2 332 aaKnown RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 TAB2Q9NYJ8 693 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 LARSQ9P2J5 1176 aaKnown RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
CPNE4-206ENST00000505957 PYCARDQ9ULZ3 195 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 FANCMQ8IYD8 2048 aa11.62□□□□□ -0.55
CPNE4-206ENST00000505957 MTCL1Q9Y4B5 1905 aaKnown RBP11.61□□□□□ -0.55
CPNE4-206ENST00000505957 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 HIP1RO75146 1068 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 XYLBO75191 536 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 LRRN2O75325 713 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 C8AP07357 584 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 PLS3P13797 630 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 ABCD1P33897 745 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms