RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 SENP8Q96LD8 212 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 TSPAN18Q96SJ8 248 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 TMEM209Q96SK2 561 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 NELL2Q99435 816 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 OXCT2Q9BYC2 517 aaPredicted RBP13.25□□□□□ -0.29
SNHG4-202ENST00000505522 IKZF4Q9H2S9 585 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 UPF2Q9HAU5 1272 aaKnown RBP13.25□□□□□ -0.29
SNHG4-202ENST00000505522 ZNF334Q9HCZ1 680 aaPredicted RBP13.25□□□□□ -0.29
SNHG4-202ENST00000505522 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 CLIC4Q9Y696 253 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 TSC2P49815 1807 aa13.25□□□□□ -0.29
SNHG4-202ENST00000505522 A0A1W2PRU2 124 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 ANO9A1A5B4 782 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 MTMR11A4FU01 709 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
SNHG4-202ENST00000505522 PIRO00625 290 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 ODC1P11926 461 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 PSMC3P17980 439 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 DDIT3P35638 169 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
SNHG4-202ENST00000505522 ACOT2P49753 483 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 PLD1Q13393 1074 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 TMEM132DQ14C87 1099 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 CD302Q8IX05 232 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 KIAA2013Q8IYS2 634 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 DCLK2Q8N568 766 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 IRF7Q92985 503 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 RSPRY1Q96DX4 576 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 CCSER1Q9C0I3 900 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 TRPV4Q9HBA0 871 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 NDRG2Q9UN36 371 aaKnown RBP13.24□□□□□ -0.29
SNHG4-202ENST00000505522 ANK1P16157 1881 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 GVINP1Q7Z2Y8 2422 aa13.24□□□□□ -0.29
SNHG4-202ENST00000505522 TICRRQ7Z2Z1 1910 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 NCAM2O15394 837 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 KINO60870 393 aaKnown RBP13.23□□□□□ -0.29
SNHG4-202ENST00000505522 SOAT2O75908 522 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 ALDH1A3P47895 512 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 CDR1P51861 262 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 EPHB3P54753 998 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 MTAPQ13126 283 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 PTPAQ15257 358 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 STXBP5Q5T5C0 1151 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 ADALQ6DHV7 355 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 TSSK4Q6SA08 328 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 SFR1Q86XK3 245 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 GPIHBP1Q8IV16 184 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 MFSD6LQ8IWD5 586 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 OR10T2Q8NGX3 314 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 DEPDC1BQ8WUY9 529 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 HINFPQ9BQA5 517 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 ST6GALNAC4Q9H4F1 302 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 SLITRK6Q9H5Y7 841 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 TRPV5Q9NQA5 729 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 AGO2Q9UKV8 859 aaKnown RBP13.23□□□□□ -0.29
SNHG4-202ENST00000505522 MRPS17Q9Y2R5 130 aaKnown RBP13.23□□□□□ -0.29
SNHG4-202ENST00000505522 DERAQ9Y315 318 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 STYXL1Q9Y6J8 313 aa13.23□□□□□ -0.29
SNHG4-202ENST00000505522 ARNTLO00327 626 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 MAN2B1O00754 1011 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 ZNF263O14978 683 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 CYP11A1P05108 521 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 ABCD1P33897 745 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 FOXK2Q01167 660 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 CUL4AQ13619 759 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 SLFN12LQ6IEE8 588 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 CRELD2Q6UXH1 353 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-202ENST00000505522 GAREM2Q75VX8 874 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 DYMQ7RTS9 669 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 ZNF720Q7Z2F6 126 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 DNAJB7Q7Z6W7 309 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-202ENST00000505522 KRI1Q8N9T8 703 aaKnown RBP13.22□□□□□ -0.29
SNHG4-202ENST00000505522 ZBTB44Q8NCP5 570 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 RUBCNQ92622 972 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 NELL1Q92832 810 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 RMDN1Q96DB5 314 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 MKNK1Q9BUB5 465 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 GPR88Q9GZN0 384 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 ASB7Q9H672 318 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 PRMT8Q9NR22 394 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-202ENST00000505522 ZSCAN32Q9NX65 697 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-202ENST00000505522 C2CD2Q9Y426 696 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 PCDHGA2Q9Y5H1 932 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 PIAS3Q9Y6X2 628 aa13.22□□□□□ -0.29
SNHG4-202ENST00000505522 PPP1R37O75864 691 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 PAX3P23760 479 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 ADSSP30520 456 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 KCNA1Q09470 495 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 ERMP1Q7Z2K6 904 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 ARID3BQ8IVW6 561 aaPredicted RBP13.21□□□□□ -0.29
SNHG4-202ENST00000505522 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 ZSWIM2Q8NEG5 633 aa13.21□□□□□ -0.29
SNHG4-202ENST00000505522 ATRIPQ8WXE1 791 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms