RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ZHX3Q9H4I2 956 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 SEMA4GQ9NTN9 838 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 CDH7Q9ULB5 785 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 SRPRBQ9Y5M8 271 aaKnown RBP14.3□□□□□ -0.12
DDX41-204ENST00000504807 NCANO14594 1321 aa14.3□□□□□ -0.12
DDX41-204ENST00000504807 ANK1P16157 1881 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 MYH15Q9Y2K3 1946 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 ARHGEF37A1IGU5 675 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 SYN3O14994 580 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 OGTO15294 1046 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 MOSPD3O75425 235 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 BMP15O95972 392 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 POU2F2P09086 479 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 CEBPBP17676 345 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 CD72P21854 359 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 ADSSP30520 456 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 RPL9P32969 192 aaKnown RBP14.29□□□□□ -0.12
DDX41-204ENST00000504807 MCM4P33991 863 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 MATR3P43243 847 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX41-204ENST00000504807 ACOT2P49753 483 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 CTXN3Q4LDR2 81 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 PRSS36Q5K4E3 855 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 IL31Q6EBC2 164 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 PDXDC1Q6P996 788 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 ELMSAN1Q6PJG2 1045 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 GLIS3Q8NEA6 775 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 ZNF461Q8TAF7 563 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 KXD1Q9BQD3 176 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 PANK2Q9BZ23 570 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX41-204ENST00000504807 TBC1D7Q9P0N9 293 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 CEP72Q9P209 647 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 NUB1Q9Y5A7 615 aa14.29□□□□□ -0.12
DDX41-204ENST00000504807 SHISA7A6NL88 538 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
DDX41-204ENST00000504807 M0QZQ0 153 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 TRAPPC3O43617 180 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 RHOP08100 348 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 ATF2P15336 505 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 FCARP24071 287 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 PABPC1LQ4VXU2 614 aaKnown RBP14.28□□□□□ -0.12
DDX41-204ENST00000504807 LAIR1Q6GTX8 287 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 UNQ6494/PRO21346Q6UXR6 183 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 PRR23BQ6ZRT6 265 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 ZNF720Q7Z2F6 126 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 TTC9BQ8N6N2 239 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 INSL5Q9Y5Q6 135 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 STYXL1Q9Y6J8 313 aa14.28□□□□□ -0.12
DDX41-204ENST00000504807 KRT18P05783 430 aaKnown RBP14.27□□□□□ -0.13
DDX41-204ENST00000504807 RETP07949 1114 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 GJA1P17302 382 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 PPP2R3AQ06190 1150 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 ADCY1Q08828 1119 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 SLC39A14Q15043 492 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 MLF2Q15773 248 aaPredicted RBP14.27□□□□□ -0.13
DDX41-204ENST00000504807 UVSSAQ2YD98 709 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 SPATA1Q5VX52 437 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 LRSAM1Q6UWE0 723 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 EFCAB13Q8IY85 973 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 TCEAL8Q8IYN2 117 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 RASSF8Q8NHQ8 419 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 HPS3Q969F9 1004 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 MCRS1Q96EZ8 462 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 INTS4Q96HW7 963 aaKnown RBP14.27□□□□□ -0.13
DDX41-204ENST00000504807 ZSWIM3Q96MP5 696 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 PGLYRP2Q96PD5 576 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 DDX23Q9BUQ8 820 aaKnown RBP14.27□□□□□ -0.13
DDX41-204ENST00000504807 ST6GALNAC4Q9H4F1 302 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 CYP4F11Q9HBI6 524 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 DSPP15924 2871 aaKnown RBP14.27□□□□□ -0.13
DDX41-204ENST00000504807 COL4A2P08572 1712 aa14.27□□□□□ -0.13
DDX41-204ENST00000504807 STX6O43752 255 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 LRP3O75074 770 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 XYLBO75191 536 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 TBCAO75347 108 aaKnown RBP14.26□□□□□ -0.13
DDX41-204ENST00000504807 SOAT2O75908 522 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 PDCP20941 246 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 PKP1Q13835 747 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 SLC44A4Q53GD3 710 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 FOXD4L5Q5VV16 416 aaPredicted RBP14.26□□□□□ -0.13
DDX41-204ENST00000504807 BEST2Q8NFU1 509 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 OR10T2Q8NGX3 314 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 FOXD4L4Q8WXT5 416 aaPredicted RBP14.26□□□□□ -0.13
DDX41-204ENST00000504807 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 CORO1BQ9BR76 489 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 LRRC3Q9BY71 257 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 DNAJC25Q9H1X3 360 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 LTB4R2Q9NPC1 389 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 PRMT8Q9NR22 394 aaPredicted RBP14.26□□□□□ -0.13
DDX41-204ENST00000504807 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
DDX41-204ENST00000504807 UBQLN1Q9UMX0 589 aaKnown RBP14.26□□□□□ -0.13
DDX41-204ENST00000504807 LHX6Q9UPM6 363 aa14.26□□□□□ -0.13
DDX41-204ENST00000504807 ASH1LQ9NR48 2969 aaKnown RBP14.25□□□□□ -0.13
DDX41-204ENST00000504807 MAST4O15021 2626 aa14.25□□□□□ -0.13
DDX41-204ENST00000504807 ANO9A1A5B4 782 aa14.25□□□□□ -0.13
DDX41-204ENST00000504807 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms