RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 C7orf25Q9BPX7 421 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 OXCT2Q9BYC2 517 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 PLA2G2FQ9BZM2 168 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 DLGAP2Q9P1A6 1054 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 POLIQ9UNA4 740 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 YIPF1Q9Y548 306 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 PCDHB13Q9Y5F0 798 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 DENND4CQ5VZ89 1909 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 MTMR11A4FU01 709 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 OR6C75A6NL08 312 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 IL18RAPO95256 599 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 PTPN2P17706 415 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 PAX3P23760 479 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 CASP1P29466 404 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 GPC5P78333 572 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 DNM1Q05193 864 aaKnown RBP15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 TWF1Q12792 350 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 CENPPQ6IPU0 288 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 C1orf127Q8N9H9 656 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 DHX58Q96C10 678 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 FAM213AQ9BRX8 229 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 DPP3Q9NY33 737 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 GDE1Q9NZC3 331 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 SIX4Q9UIU6 781 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 RCOR1Q9UKL0 485 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 EXOC7Q9UPT5 735 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 OBSL1O75147 1896 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 PTPRJQ12913 1337 aa15.14■□□□□ 0.01
PDLIM7-211ENST00000504318 PRRG1O14668 218 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 TGFB1I1O43294 461 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 LRG1P02750 347 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 ODC1P11926 461 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 ATL3Q6DD88 541 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 LIMS2Q7Z4I7 341 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 ALYREFQ86V81 257 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 LRRTM3Q86VH5 581 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 ZNF507Q8TCN5 953 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 KCNG4Q8TDN1 519 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 NUP210Q8TEM1 1887 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 ZSWIM3Q96MP5 696 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 PGLYRP2Q96PD5 576 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 KXD1Q9BQD3 176 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 DDX23Q9BUQ8 820 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 ZCWPW1Q9H0M4 648 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 GZF1Q9H116 711 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 KIF26AQ9ULI4 1882 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 MRPS23Q9Y3D9 190 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 MIA3Q5JRA6 1907 aa15.13■□□□□ 0.01
PDLIM7-211ENST00000504318 FANCMQ8IYD8 2048 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 CACNA1IQ9P0X4 2223 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 GOLGA8IPA6NC78 632 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 GOLGA8JA6NMD2 632 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 EIF3DO15371 548 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 POLR2DO15514 142 aaKnown RBP15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 KLRC4O43908 158 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 EXTL3O43909 919 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 ECI2O75521 394 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 CPB1P15086 417 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 GLULP15104 373 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 ELF1P32519 619 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 TAF6P49848 677 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 MRE11P49959 708 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 STARD6P59095 220 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 DUSP4Q13115 394 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 BECN1Q14457 450 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 TANGO2Q6ICL3 276 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 MTSS1LQ765P7 747 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 CCDC65Q8IXS2 484 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 IQUBQ8NA54 791 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 FLCNQ8NFG4 579 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 SHKBP1Q8TBC3 707 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 SCFD1Q8WVM8 642 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 MCRS1Q96EZ8 462 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 PKMYT1Q99640 499 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 CORO1BQ9BR76 489 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 MKNK1Q9BUB5 465 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 PCIF1Q9H4Z3 704 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 TMEM206Q9H813 350 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 ARHGEF3Q9NR81 526 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 HSFX1Q9UBD0 423 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 CA14Q9ULX7 337 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 PATJQ8NI35 1801 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 F5P12259 2224 aa15.12■□□□□ 0.01
PDLIM7-211ENST00000504318 PTPRDP23468 1912 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 CYB561D2O14569 222 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 ACTN4O43707 911 aaKnown RBP15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 LDHAP00338 332 aaKnown RBP15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 BMT2Q1RMZ1 405 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 FAM78AQ5JUQ0 283 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 WSCD1Q658N2 575 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 CBWD2Q8IUF1 395 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 CCDC105Q8IYK2 499 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
PDLIM7-211ENST00000504318 ASB16Q96NS5 453 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms