RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PNKPQ96T60 521 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 ZNF518BQ9C0D4 1074 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 SMARCAL1Q9NZC9 954 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 CNTN3Q9P232 1028 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 PCDHGC3Q9UN70 934 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 TRIM17Q9Y577 477 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 TRPV2Q9Y5S1 764 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 CFHP08603 1231 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 ELNP15502 786 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 C1QBPQ07021 282 aaKnown RBP23.44■■□□□ 1.34
PTPN13-205ENST00000502971 ZBTB6Q15916 424 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 PTPROQ16827 1216 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 MAP3K21Q5TCX8 1036 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 GDF6Q6KF10 455 aaPredicted RBP23.44■■□□□ 1.34
PTPN13-205ENST00000502971 RPAINQ86UA6 219 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 TTC39CQ8N584 583 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 USP38Q8NB14 1042 aa23.44■■□□□ 1.34
PTPN13-205ENST00000502971 CEP104O60308 925 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 MYO1EQ12965 1108 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 MESDQ14696 234 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 KCNA10Q16322 511 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 ZNF394Q53GI3 561 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 UBXN11Q5T124 520 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 PASD1Q8IV76 773 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 BEST2Q8NFU1 509 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 ADAM22Q9P0K1 906 aa23.43■■□□□ 1.34
PTPN13-205ENST00000502971 MED7O43513 233 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 RECQL4O94761 1208 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 ASGR1P07306 291 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 BRD2P25440 801 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 GUCY2FP51841 1108 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 CCSAPQ6IQ19 270 aaPredicted RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 SERINC5Q86VE9 423 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 UBL4BQ8N7F7 174 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 PCSK9Q8NBP7 692 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 HNRNPLLQ8WVV9 542 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 RUBCNQ92622 972 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 SDCBP2Q9H190 292 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 WNT8AQ9H1J5 351 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 CARD9Q9H257 536 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 NXF3Q9H4D5 531 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 CHORDC1Q9UHD1 332 aaPredicted RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 TTC7AQ9ULT0 858 aaPredicted RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 HES2Q9Y543 173 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 CDY2AQ9Y6F7 541 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 PGRMC1O00264 195 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 RRM1P23921 792 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 CDH5P33151 784 aaPredicted RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 RAP1GAPP47736 663 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 TNNC1P63316 161 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 GLE1Q53GS7 698 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 FAM47CQ5HY64 1035 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 FAM228AQ86W67 206 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 TMEM35BQ8NCS4 154 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 ZMAT2Q96NC0 199 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 SMYD3Q9H7B4 428 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 MRPL47Q9HD33 250 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 RBM12Q9NTZ6 932 aaKnown RBP23.42■■□□□ 1.34
PTPN13-205ENST00000502971 CEP83Q9Y592 693 aa23.42■■□□□ 1.34
PTPN13-205ENST00000502971 TMEM110-MUSTN1A8MSY1 372 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 CILPO75339 1184 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 ERLIN1O75477 346 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 COMTP21964 271 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 GRK4P32298 578 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 RAD23BP54727 409 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 CLUL1Q15846 466 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 XKR4Q5GH76 650 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 CC2D1AQ6P1N0 951 aaPredicted RBP23.41■■□□□ 1.34
PTPN13-205ENST00000502971 TMEM130Q8N3G9 435 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 ZSWIM1Q9BR11 485 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 C11orf70Q9BRQ4 267 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 TMEM59LQ9UK28 342 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 UBQLN1Q9UMX0 589 aaKnown RBP23.41■■□□□ 1.34
PTPN13-205ENST00000502971 NOC2LQ9Y3T9 749 aaKnown RBP23.41■■□□□ 1.34
PTPN13-205ENST00000502971 SCINQ9Y6U3 715 aa23.41■■□□□ 1.34
PTPN13-205ENST00000502971 MMP8P22894 467 aa23.4■■□□□ 1.34
PTPN13-205ENST00000502971 CDH8P55286 799 aa23.4■■□□□ 1.34
PTPN13-205ENST00000502971 PTP4A2Q12974 167 aa23.4■■□□□ 1.34
PTPN13-205ENST00000502971 LRRC52Q8N7C0 313 aa23.4■■□□□ 1.34
PTPN13-205ENST00000502971 TFAP2BQ92481 460 aa23.4■■□□□ 1.34
PTPN13-205ENST00000502971 ARFGAP3Q9NP61 516 aa23.4■■□□□ 1.34
PTPN13-205ENST00000502971 DDX20Q9UHI6 824 aaKnown RBP23.4■■□□□ 1.34
PTPN13-205ENST00000502971 XPOTO43592 962 aaKnown RBP23.39■■□□□ 1.34
PTPN13-205ENST00000502971 CALB1P05937 261 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 SSTR3P32745 418 aaPredicted RBP23.39■■□□□ 1.34
PTPN13-205ENST00000502971 VSNL1P62760 191 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 INCA1Q0VD86 236 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 WHAMMQ8TF30 809 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 CD101Q93033 1021 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 TMEM176AQ96HP8 235 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 LHX5Q9H2C1 402 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 ZNF446Q9NWS9 450 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 ANAPC7Q9UJX3 599 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 IPPQ9Y573 584 aa23.39■■□□□ 1.34
PTPN13-205ENST00000502971 TLR3O15455 904 aaKnown RBP23.39■■□□□ 1.33
PTPN13-205ENST00000502971 CABYRO75952 493 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 CD4P01730 458 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 KCNE1P15382 129 aa23.39■■□□□ 1.33
PTPN13-205ENST00000502971 AKAP5P24588 427 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms