RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 GJC1P36383 396 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 NFX1Q12986 1120 aaKnown RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 ACO2Q99798 780 aaKnown RBP17.57■□□□□ 0.4
VCAN-204ENST00000502527 ZNF518BQ9C0D4 1074 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 NIF3L1Q9GZT8 377 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 CCDC134Q9H6E4 229 aa17.57■□□□□ 0.4
VCAN-204ENST00000502527 PRKCBP05771 671 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 MYL6P60660 151 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 LAMTOR4Q0VGL1 99 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 MAPK6Q16659 721 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 LONRF1Q17RB8 773 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 LRRC38Q5VT99 294 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 SMYD5Q6GMV2 418 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 IPO4Q8TEX9 1081 aaKnown RBP17.56■□□□□ 0.4
VCAN-204ENST00000502527 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
VCAN-204ENST00000502527 MTMR12Q9C0I1 747 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 C2orf40Q9H1Z8 148 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 H0YHG0 523 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 GJB6O95452 261 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 SRGAP2CP0DJJ0 459 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 VPS41P49754 854 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 MCL1Q07820 350 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 ACTN3Q08043 901 aaPredicted RBP17.56■□□□□ 0.4
VCAN-204ENST00000502527 TRPC3Q13507 836 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 PLCB4Q15147 1175 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 LY6KQ17RY6 165 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 DNAJC24Q6P3W2 148 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 CEP128Q6ZU80 1094 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 GPC2Q8N158 579 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 P3H4Q92791 437 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 FAM212AQ96EL1 285 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 ACTR5Q9H9F9 607 aaPredicted RBP17.56■□□□□ 0.4
VCAN-204ENST00000502527 CISHQ9NSE2 258 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 CSADQ9Y600 493 aa17.56■□□□□ 0.4
VCAN-204ENST00000502527 GOLGA6L7A0A1B0GV03 622 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 ASAP2O43150 1006 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 TCEA3O75764 348 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 RPL7AP62424 266 aaKnown RBP17.55■□□□□ 0.4
VCAN-204ENST00000502527 TAP1Q03518 808 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 KYNUQ16719 465 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 KCNV1Q6PIU1 500 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 GSTA5Q7RTV2 222 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 EXOC3L1Q86VI1 746 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 RNF149Q8NC42 400 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 CCHCR1Q8TD31 782 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 FOXP3Q9BZS1 431 aa17.55■□□□□ 0.4
VCAN-204ENST00000502527 CPSF3Q9UKF6 684 aaKnown RBP17.55■□□□□ 0.4
VCAN-204ENST00000502527 TJP3O95049 919 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 CNGA2Q16280 664 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 ZFYVE27Q5T4F4 411 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 IZUMO3Q5VZ72 239 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 SCARA3Q6AZY7 606 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 DCUN1D2Q6PH85 259 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 GADL1Q6ZQY3 521 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 EEPD1Q7L9B9 569 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 RELL1Q8IUW5 271 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 CNPY4Q8N129 248 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 KAT2BQ92831 832 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 ARHGEF2Q92974 986 aaKnown RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 SLITRK1Q96PX8 696 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 PRMT1Q99873 361 aaKnown RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 FAM118BQ9BPY3 351 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 NINJ2Q9NZG7 142 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 LGR5O75473 907 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 KRT1P04264 644 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 EIF4BP23588 611 aaKnown RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 BRD2P25440 801 aaKnown RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 KLRC2P26717 231 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 MARK3P27448 753 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 COPS2P61201 443 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 CCDC38Q502W7 563 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 DRICH1Q6PGQ1 229 aaPredicted RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 PLPPR4Q7Z2D5 763 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 ANKS1BQ7Z6G8 1248 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 CCDC197Q8NCU1 140 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 GPR20Q99678 358 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 JPH2Q9BR39 696 aaPredicted RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 DNAJC17Q9NVM6 304 aaKnown RBP17.54■□□□□ 0.4
VCAN-204ENST00000502527 CEP83Q9Y592 693 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 WDR90Q96KV7 1748 aa17.54■□□□□ 0.4
VCAN-204ENST00000502527 IGKV6-21A0A0C4DH24 114 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 TCRBV5S1A1TA0A578 114 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 NOP56O00567 594 aaKnown RBP17.53■□□□□ 0.4
VCAN-204ENST00000502527 ABLIM1O14639 778 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 LIASO43766 372 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 NF2P35240 595 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 YWHAEP62258 255 aaKnown RBP17.53■□□□□ 0.4
VCAN-204ENST00000502527 TFAMQ00059 246 aaKnown RBP17.53■□□□□ 0.4
VCAN-204ENST00000502527 PIGHQ14442 188 aaPredicted RBP17.53■□□□□ 0.4
VCAN-204ENST00000502527 GPAT2Q6NUI2 795 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 TSHZ1Q6ZSZ6 1077 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 ANKS4BQ8N8V4 417 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 MCEEQ96PE7 176 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 CCDC77Q9BR77 488 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 EFCC1Q9HA90 598 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 PCDHGC3Q9UN70 934 aa17.53■□□□□ 0.4
VCAN-204ENST00000502527 PI4K2BG5E9Z4 385 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 CDH5P33151 784 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms