RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RDH13Q8NBN7 331 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
HLA-B-254ENST00000497377 ADAMTS19Q8TE59 1207 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 SUSD6Q92537 303 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 MFSD14AQ96MC6 490 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 NECTIN4Q96NY8 510 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 POP1Q99575 1024 aaKnown RBP12.37□□□□□ -0.43
HLA-B-254ENST00000497377 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 RHOBTB2Q9BYZ6 727 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 MAFFQ9ULX9 164 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
HLA-B-254ENST00000497377 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
HLA-B-254ENST00000497377 SCN1AP35498 2009 aa12.37□□□□□ -0.43
HLA-B-254ENST00000497377 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
HLA-B-254ENST00000497377 MAPK13O15264 365 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 TGM5O43548 720 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 TBC1D4O60343 1298 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 OAZ2O95190 189 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 PAPLNO95428 1278 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 ITGB3P05106 788 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 CYP11A1P05108 521 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 RPL17P18621 184 aaKnown RBP12.36□□□□□ -0.43
HLA-B-254ENST00000497377 OR1D2P34982 312 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 MTHFRP42898 656 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 AP3M2P53677 418 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 RBP5P82980 135 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 ENPEPQ07075 957 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 STIM1Q13586 685 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 EDRF1Q3B7T1 1238 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 CTXN3Q4LDR2 81 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 TPGS2Q68CL5 300 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 C15orf39Q6ZRI6 1047 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 PALB2Q86YC2 1186 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 CSGALNACT2Q8N6G5 542 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 KREMEN2Q8NCW0 462 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 SENP8Q96LD8 212 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 RIPOR3Q96MK2 946 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 UHRF1Q96T88 793 aaPredicted RBP12.36□□□□□ -0.43
HLA-B-254ENST00000497377 CGRRF1Q99675 332 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 MTMR12Q9C0I1 747 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 MAN1C1Q9NR34 630 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 ZDHHC7Q9NXF8 308 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 FBXW11Q9UKB1 542 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 MAPK8IP1Q9UQF2 711 aa12.36□□□□□ -0.43
HLA-B-254ENST00000497377 NCOR1O75376 2440 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 OR6C75A6NL08 312 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 KPNA7A9QM74 516 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 GOLGA6L22H0YM25 854 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 PPEF2O14830 753 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
HLA-B-254ENST00000497377 IL9P15248 144 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 TNNI1P19237 187 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 POLR2BP30876 1174 aaKnown RBP12.35□□□□□ -0.43
HLA-B-254ENST00000497377 HOXA9P31269 272 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 PRCPP42785 496 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 CLDN10P78369 228 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 MYO1EQ12965 1108 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 CBX2Q14781 532 aaPredicted RBP12.35□□□□□ -0.43
HLA-B-254ENST00000497377 UVSSAQ2YD98 709 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 ATAT1Q5SQI0 421 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 RARS2Q5T160 578 aaKnown RBP12.35□□□□□ -0.43
HLA-B-254ENST00000497377 LIN9Q5TKA1 542 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 CEP135Q66GS9 1140 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 METTL23Q86XA0 190 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 GLYCTKQ8IVS8 523 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 ADHFE1Q8IWW8 467 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 ZNF461Q8TAF7 563 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 SPATA18Q8TC71 538 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 FBXL5Q9UKA1 691 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 AGAP1Q9UPQ3 857 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 CDY1Q9Y6F8 540 aa12.35□□□□□ -0.43
HLA-B-254ENST00000497377 GOLGA8CPA6NN73 597 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 CYB561D2O14569 222 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 PSMA7O14818 248 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 SPTLC1O15269 473 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 ADAM12O43184 909 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 ZMYND10O75800 440 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 KRT19P08727 400 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 HNRNPA1P09651 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
HLA-B-254ENST00000497377 NR2F2P24468 414 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 ADAM9Q13443 819 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 OVOS1Q6IE37 1185 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 CENPPQ6IPU0 288 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 FOXR2Q6PJQ5 311 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 RSPO2Q6UXX9 243 aaPredicted RBP12.34□□□□□ -0.43
HLA-B-254ENST00000497377 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 TRAPPC11Q7Z392 1133 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 GPR149Q86SP6 731 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 SMYD4Q8IYR2 804 aaPredicted RBP12.34□□□□□ -0.43
HLA-B-254ENST00000497377 TMEM130Q8N3G9 435 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 CXorf38Q8TB03 319 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 PARD3BQ8TEW8 1205 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 BORCS6Q96GS4 357 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms