RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 EPHB3P54753 998 aa14.69□□□□□ -0.06
COL1A1-209ENST00000495677 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
COL1A1-209ENST00000495677 GPR17Q13304 367 aa14.69□□□□□ -0.06
COL1A1-209ENST00000495677 UNQ6494/PRO21346Q6UXR6 183 aa14.69□□□□□ -0.06
COL1A1-209ENST00000495677 GAREM2Q75VX8 874 aa14.69□□□□□ -0.06
COL1A1-209ENST00000495677 ERMNQ8TAM6 284 aa14.69□□□□□ -0.06
COL1A1-209ENST00000495677 YTHDC1Q96MU7 727 aaKnown RBP14.69□□□□□ -0.06
COL1A1-209ENST00000495677 TMEM209Q96SK2 561 aa14.69□□□□□ -0.06
COL1A1-209ENST00000495677 KIFC3Q9BVG8 833 aa14.69□□□□□ -0.06
COL1A1-209ENST00000495677 TMEM121BQ9BXQ6 578 aaPredicted RBP14.69□□□□□ -0.06
COL1A1-209ENST00000495677 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.69□□□□□ -0.06
COL1A1-209ENST00000495677 BTBD18B2RXH4 712 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 DPYSL4O14531 572 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 ABLIM1O14639 778 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 EXTL3O43909 919 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 MPLP40238 635 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 ALDH1A3P47895 512 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 AARSP49588 968 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL1A1-209ENST00000495677 YWHAHQ04917 246 aaPredicted RBP14.68□□□□□ -0.06
COL1A1-209ENST00000495677 ZNF568Q3ZCX4 644 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 TMEM196Q5HYL7 178 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 RNF43Q68DV7 783 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 DNAJB7Q7Z6W7 309 aaPredicted RBP14.68□□□□□ -0.06
COL1A1-209ENST00000495677 BPIFB1Q8TDL5 484 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 PSMG2Q969U7 264 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 MRPL4Q9BYD3 311 aaKnown RBP14.68□□□□□ -0.06
COL1A1-209ENST00000495677 ZMYM5Q9UJ78 669 aa14.68□□□□□ -0.06
COL1A1-209ENST00000495677 RBM19Q9Y4C8 960 aaKnown RBP14.68□□□□□ -0.06
COL1A1-209ENST00000495677 CEP192Q8TEP8 1941 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 ANAPC1Q9H1A4 1944 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 SCN1AP35498 2009 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 OR6C75A6NL08 312 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 C1QTNF9BB2RNN3 333 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 TRDMT1O14717 391 aaKnown RBP14.67□□□□□ -0.06
COL1A1-209ENST00000495677 C1QTNF9P0C862 333 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 CCDC192P0DO97 292 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 LRPAP1P30533 357 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 OSTNP61366 133 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 DUSP4Q13115 394 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 ORC2Q13416 577 aaPredicted RBP14.67□□□□□ -0.06
COL1A1-209ENST00000495677 MYBPC2Q14324 1141 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 CCDC6Q16204 474 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 ITPRIPL2Q3MIP1 535 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 PLK5Q496M5 336 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 CENPPQ6IPU0 288 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 PSAPL1Q6NUJ1 521 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 C18orf25Q96B23 403 aaPredicted RBP14.67□□□□□ -0.06
COL1A1-209ENST00000495677 ZFYVE19Q96K21 471 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 NTPCRQ9BSD7 190 aaKnown RBP14.67□□□□□ -0.06
COL1A1-209ENST00000495677 DUSP15Q9H1R2 295 aaPredicted RBP14.67□□□□□ -0.06
COL1A1-209ENST00000495677 CRISPLD1Q9H336 500 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 TASP1Q9H6P5 420 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 ARHGAP28Q9P2N2 729 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 SPEGQ15772 3267 aa14.67□□□□□ -0.06
COL1A1-209ENST00000495677 FASNP49327 2511 aaKnown RBP14.66□□□□□ -0.06
COL1A1-209ENST00000495677 MEFVO15553 781 aaPredicted RBP14.66□□□□□ -0.06
COL1A1-209ENST00000495677 NPTX2P47972 431 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 ACAP1Q15027 740 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 ZBTB6Q15916 424 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 SLC10A6Q3KNW5 377 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 ARHGAP15Q53QZ3 475 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 STXBP5Q5T5C0 1151 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 PKN3Q6P5Z2 889 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 MPZL3Q6UWV2 235 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 TAS1R3Q7RTX0 852 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 DIS3L2Q8IYB7 885 aaKnown RBP14.66□□□□□ -0.06
COL1A1-209ENST00000495677 FAM83CQ9BQN1 747 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 TARS2Q9BW92 718 aaKnown RBP14.66□□□□□ -0.06
COL1A1-209ENST00000495677 ATXN3LQ9H3M9 355 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 C17orf75Q9HAS0 396 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 PLEKHA5Q9HAU0 1116 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 POLD4Q9HCU8 107 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 THG1LQ9NWX6 298 aaKnown RBP14.66□□□□□ -0.06
COL1A1-209ENST00000495677 SLC8A2Q9UPR5 921 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 TSC2P49815 1807 aa14.66□□□□□ -0.06
COL1A1-209ENST00000495677 TNRC6BQ9UPQ9 1833 aaKnown RBP14.66□□□□□ -0.06
COL1A1-209ENST00000495677 RHOBTB1O94844 696 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 CEACAM1P13688 526 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 CYP3A5P20815 502 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 MCM2P49736 904 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 PEX3P56589 373 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 AMPD2Q01433 879 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 TNK2Q07912 1038 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 GRSF1Q12849 480 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL1A1-209ENST00000495677 ECM1Q16610 540 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 GPR158Q5T848 1215 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 DAB2IPQ5VWQ8 1189 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 HAUS3Q68CZ6 603 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 ITIH5Q86UX2 942 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 TTC8Q8TAM2 541 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 TCHPQ9BT92 498 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 BHMT2Q9H2M3 363 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 EBF1Q9UH73 591 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 WDFY3Q8IZQ1 3526 aa14.65□□□□□ -0.06
COL1A1-209ENST00000495677 PLXND1Q9Y4D7 1925 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 BCLAF3A2AJT9 711 aaKnown RBP14.64□□□□□ -0.07
COL1A1-209ENST00000495677 MTMR11A4FU01 709 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 SOBPA7XYQ1 873 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 TYMPP19971 482 aa14.64□□□□□ -0.07
COL1A1-209ENST00000495677 CSRP1P21291 193 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms