RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CD72P21854 359 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 CASP5P51878 434 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 NUBP1P53384 320 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 WNT7BP56706 349 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 GPR17Q13304 367 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 POSTNQ15063 836 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 SLC44A4Q53GD3 710 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 L1TD1Q5T7N2 865 aaKnown RBP10.39□□□□□ -0.75
MSH5-218ENST00000494646 SCARA3Q6AZY7 606 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 OVOS1Q6IE37 1185 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 IQCEQ6IPM2 695 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 ARMCX5Q6P1M9 558 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 PDZD4Q76G19 769 aaPredicted RBP10.39□□□□□ -0.75
MSH5-218ENST00000494646 HSCBQ8IWL3 235 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 EFCAB13Q8IY85 973 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 ELMOD1Q8N336 334 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 DTWD2Q8NBA8 298 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 ATAD1Q8NBU5 361 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 GLIS3Q8NEA6 775 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 DHX58Q96C10 678 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 ZSWIM3Q96MP5 696 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 TSPAN18Q96SJ8 248 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 IRF2BPLQ9H1B7 796 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 TBC1D17Q9HA65 648 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 ARHGEF3Q9NR81 526 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 SLC2A4RGQ9NR83 387 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 SEL1LQ9UBV2 794 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 EXOC7Q9UPT5 735 aa10.39□□□□□ -0.75
MSH5-218ENST00000494646 ZNF638Q14966 1978 aaKnown RBP10.39□□□□□ -0.75
MSH5-218ENST00000494646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
MSH5-218ENST00000494646 ANO9A1A5B4 782 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 OR6C75A6NL08 312 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 ZNF197O14709 1029 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 PPP6R2O75170 966 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 MOSPD3O75425 235 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 SOAT2O75908 522 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 ZSCAN22P10073 491 aaPredicted RBP10.38□□□□□ -0.75
MSH5-218ENST00000494646 ODC1P11926 461 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 AARSP49588 968 aaKnown RBP eCLIP10.38□□□□□ -0.75
MSH5-218ENST00000494646 TFAMQ00059 246 aaKnown RBP10.38□□□□□ -0.75
MSH5-218ENST00000494646 PRSS36Q5K4E3 855 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 CENPPQ6IPU0 288 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 CCDC65Q8IXS2 484 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 HVCN1Q96D96 273 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 FAM84AQ96KN4 292 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 PYM1Q9BRP8 204 aaKnown RBP10.38□□□□□ -0.75
MSH5-218ENST00000494646 FOXQ1Q9C009 403 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 GDE1Q9NZC3 331 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 DERAQ9Y315 318 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 SIT1Q9Y3P8 196 aa10.38□□□□□ -0.75
MSH5-218ENST00000494646 FRMD3A2A2Y4 597 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 MTMR11A4FU01 709 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 CUTAO60888 179 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 LDHAP00338 332 aaKnown RBP10.37□□□□□ -0.75
MSH5-218ENST00000494646 TYMPP19971 482 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 CASP1P29466 404 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 ALDH1A3P47895 512 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 TAF6P49848 677 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 EPHB3P54753 998 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 STARD6P59095 220 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 PKP1Q13835 747 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 GRM2Q14416 872 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 ANGPT1Q15389 498 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 TEAD2Q15562 447 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 SLC39A12Q504Y0 691 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 FAM78AQ5JUQ0 283 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 WSCD1Q658N2 575 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 PHLDB3Q6NSJ2 640 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 SHC4Q6S5L8 630 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 METTL23Q86XA0 190 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 CCDC105Q8IYK2 499 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 THEM5Q8N1Q8 247 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 TTC9BQ8N6N2 239 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 OR10T2Q8NGX3 314 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 CBWD1Q9BRT8 395 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 OXCT2Q9BYC2 517 aaPredicted RBP10.37□□□□□ -0.75
MSH5-218ENST00000494646 ZFP14Q9HCL3 533 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 AVENQ9NQS1 362 aaPredicted RBP10.37□□□□□ -0.75
MSH5-218ENST00000494646 ASAH2Q9NR71 780 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 OLFML3Q9NRN5 406 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 C2CD2Q9Y426 696 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 MTF2Q9Y483 593 aaPredicted RBP10.37□□□□□ -0.75
MSH5-218ENST00000494646 YIPF1Q9Y548 306 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
MSH5-218ENST00000494646 MORC2Q9Y6X9 1032 aaPredicted RBP10.37□□□□□ -0.75
MSH5-218ENST00000494646 CFAP54Q96N23 3096 aa10.37□□□□□ -0.75
MSH5-218ENST00000494646 TSC2P49815 1807 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 FRYLO94915 3013 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 A0A1W2PRU2 124 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 FAM170BA6NMN3 283 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 KPNA7A9QM74 516 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 POLR2DO15514 142 aaKnown RBP10.36□□□□□ -0.75
MSH5-218ENST00000494646 GFRA3O60609 400 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 ECI2O75521 394 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 IL18RAPO95256 599 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 F13A1P00488 732 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 ITGB3P05106 788 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 KRT19P08727 400 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms