RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 C8orf74Q6P047 294 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 C1orf127Q8N9H9 656 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 C12orf50Q8NA57 414 aaPredicted RBP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 ASB7Q9H672 318 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 FAM204AQ9H8W3 233 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 CTTNBP2NLQ9P2B4 639 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 NEU2Q9Y3R4 380 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 RRN3P2A6NIE6 340 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 LACTBL1A8MY62 500 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 CEP104O60308 925 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 VTNP04004 478 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 FAM153BP0C7A2 387 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 STAG3L1P0CL83 205 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 ITGA4P13612 1032 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 KRT5P13647 590 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 ACTN2P35609 894 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 GSCP56915 257 aaPredicted RBP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 PPFIA1Q13136 1202 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 GPS2Q13227 327 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 FAM153CQ494X1 144 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 WDTC1Q8N5D0 677 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 WHAMMQ8TF30 809 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 ZNF653Q96CK0 615 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 TRIM11Q96F44 468 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 KRT12Q99456 494 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 SLITRK6Q9H5Y7 841 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 FAM124BQ9H5Z6 455 aaPredicted RBP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 ZDHHC18Q9NUE0 388 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 SEPT11Q9NVA2 429 aaKnown RBP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 FAM153AQ9UHL3 310 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 SMIM35A0A1B0GVV1 85 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 INO80B-WBP1J3KQ70 363 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 RNF40O75150 1001 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 CXCL8P10145 99 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 MATR3P43243 847 aaKnown RBP eCLIP11.71□□□□□ -0.53
ZIC4-216ENST00000494569 FAM71BQ8TC56 605 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 RNPC3Q96LT9 517 aaKnown RBP11.71□□□□□ -0.53
ZIC4-216ENST00000494569 INO80BQ9C086 356 aaPredicted RBP11.71□□□□□ -0.53
ZIC4-216ENST00000494569 SDCBP2Q9H190 292 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 PRO3102Q9H379 93 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 PCDHB4Q9Y5E5 795 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 DOCK3Q8IZD9 2030 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 A0A1W2PPC1 479 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 NFICP08651 508 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 GNA15P30679 374 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 TNNC1P63316 161 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 CLUL1Q15846 466 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.53
ZIC4-216ENST00000494569 CCDC142Q17RM4 750 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 MAP9Q49MG5 647 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 ALKAL1Q6UXT8 129 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 ZNF606Q8WXB4 792 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.53
ZIC4-216ENST00000494569 CISHQ9NSE2 258 aa11.71□□□□□ -0.53
ZIC4-216ENST00000494569 CNOT8Q9UFF9 292 aaKnown RBP11.71□□□□□ -0.53
ZIC4-216ENST00000494569 CHORDC1Q9UHD1 332 aaPredicted RBP11.71□□□□□ -0.53
ZIC4-216ENST00000494569 NRCAMQ92823 1304 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 ZEB2O60315 1214 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 LSM8O95777 96 aaKnown RBP11.71□□□□□ -0.54
ZIC4-216ENST00000494569 HARSP12081 509 aaKnown RBP11.71□□□□□ -0.54
ZIC4-216ENST00000494569 MMP8P22894 467 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 HSPA9P38646 679 aaKnown RBP11.71□□□□□ -0.54
ZIC4-216ENST00000494569 GRM5P41594 1212 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 IGBP1P78318 339 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.54
ZIC4-216ENST00000494569 ZBTB6Q15916 424 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 JADE1Q6IE81 842 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 EMBQ6PCB8 327 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 TMEM270Q6UE05 265 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 SLCO2A1Q92959 643 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 BTBD6Q96KE9 485 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 PLEKHA4Q9H4M7 779 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.71□□□□□ -0.54
ZIC4-216ENST00000494569 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.54
ZIC4-216ENST00000494569 TRIM66O15016 1216 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 SMIM10L2AP0DMW4 78 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 SMIM10L2BP0DMW5 78 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 RRM1P23921 792 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 ATICP31939 592 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
ZIC4-216ENST00000494569 EPHB4P54760 987 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 PCBP1Q15365 356 aaKnown RBP eCLIP11.7□□□□□ -0.54
ZIC4-216ENST00000494569 CCL14Q16627 93 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 PTPROQ16827 1216 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 NT5DC4Q86YG4 428 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 THNSL1Q8IYQ7 743 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 TMEM130Q8N3G9 435 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 CPA5Q8WXQ8 436 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 CPB2Q96IY4 423 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 MED4Q9NPJ6 270 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 HEXIM1O94992 359 aaKnown RBP11.7□□□□□ -0.54
ZIC4-216ENST00000494569 TMOD1P28289 359 aa11.7□□□□□ -0.54
ZIC4-216ENST00000494569 MAN1A1P33908 653 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms