RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CSDE1O75534 798 aaKnown RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 LEFTY1O75610 366 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 CST3P01034 146 aaPredicted RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 MMP1P03956 469 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 LINC00271P0C7V0 271 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 ZSCAN20P17040 1043 aaPredicted RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 QARSP47897 775 aaKnown RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 GATMP50440 423 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 DNM2P50570 870 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 CLCQ05315 142 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 ST3GAL1Q11201 340 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 DRP2Q13474 957 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 PAN2Q504Q3 1202 aaKnown RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 GK5Q6ZS86 529 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 ANO5Q75V66 913 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 ZNF765Q7L2R6 523 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 CCDC83Q8IWF9 413 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 DIS3L2Q8IYB7 885 aaKnown RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 CMTR2Q8IYT2 770 aaKnown RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 TOP6BLQ8N6T0 577 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 SCLT1Q96NL6 688 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 DPH2Q9BQC3 489 aaPredicted RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 C11orf84Q9BUA3 381 aaPredicted RBP9.03□□□□□ -0.96
RIF1-211ENST00000494333 OSBPL1AQ9BXW6 950 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 C1orf112Q9NSG2 853 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 VAV3Q9UKW4 847 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 PTPRSQ13332 1948 aa9.03□□□□□ -0.96
RIF1-211ENST00000494333 A0A0C4DFX4 3053 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 CHD9Q3L8U1 2897 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 IGKV6-21A0A0C4DH24 114 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 PRR19A6NJB7 356 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 GRM6O15303 877 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 DKC1O60832 514 aaKnown RBP eCLIP9.02□□□□□ -0.97
RIF1-211ENST00000494333 MAFO75444 373 aaPredicted RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 CSPG5O95196 566 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 DARSP14868 501 aaKnown RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 FGFR4P22455 802 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 ZNF165P49910 485 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 GPC3P51654 580 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 NPEPPSP55786 919 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 FAM189BP81408 668 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 CDC42EP1Q00587 391 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 GUCY1B3Q02153 619 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 CYP27A1Q02318 531 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 EPHA7Q15375 998 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 FAM102BQ5T8I3 360 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 PLA2G4FQ68DD2 849 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 NCAPH2Q6IBW4 605 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 SLFN12Q8IYM2 578 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 CEP89Q96ST8 783 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 UHRF1Q96T88 793 aaPredicted RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 KIF2CQ99661 725 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 GCOM2Q9BZD3 368 aaPredicted RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 ATP6V0A4Q9HBG4 840 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 ALG13Q9NP73 1137 aaKnown RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 CYP26B1Q9NR63 512 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 RGL1Q9NZL6 768 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 SUCLA2Q9P2R7 463 aaPredicted RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 WRAP73Q9P2S5 460 aaPredicted RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 PCDHA12Q9UN75 941 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 PLAGL2Q9UPG8 496 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 MRPL42Q9Y6G3 142 aaKnown RBP9.02□□□□□ -0.97
RIF1-211ENST00000494333 UNC80Q8N2C7 3258 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 MICAL3Q7RTP6 2002 aa9.02□□□□□ -0.97
RIF1-211ENST00000494333 A0A087WZ62 844 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 TBKBP1A7MCY6 615 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 UPK3BL1B0FP48 263 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 UPK3BL2E5RIL1 263 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 DNAJA2O60884 412 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 ATE1O95260 518 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 FGFR1P11362 822 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 ATP2B1P20020 1258 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 KCNA5P22460 613 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 YWHABP31946 246 aaKnown RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 TXKP42681 527 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 CYP4A11Q02928 519 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 CTTNQ14247 550 aaKnown RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 SAFBQ15424 915 aaKnown RBP eCLIP9.01□□□□□ -0.97
RIF1-211ENST00000494333 CALCRLQ16602 461 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 TIGD5Q53EQ6 642 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 TCEAL5Q5H9L2 206 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 SPOUT1Q5T280 376 aaKnown RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 EP400NLQ6ZTU2 488 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 OTUD6AQ7L8S5 288 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 RHPN2Q8IUC4 686 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 KSR1Q8IVT5 923 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 TPH2Q8IWU9 490 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 C4orf19Q8IY42 314 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 MFSD2AQ8NA29 543 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 P2RX5Q93086 422 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 DYDC2Q96IM9 177 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 CEP170P1Q96L14 293 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 ZSCAN31Q96LW9 406 aaPredicted RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 JPH2Q9BR39 696 aaPredicted RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 FDXACB1Q9BRP7 624 aaPredicted RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 LLPHQ9BRT6 129 aaKnown RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 INO80BQ9C086 356 aaPredicted RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 LMAN2LQ9H0V9 348 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 NSUN3Q9H649 340 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms