RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 CD302Q8IX05 232 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 SHKBP1Q8TBC3 707 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 ZSCAN18Q8TBC5 510 aaPredicted RBP9.89□□□□□ -0.83
NFIA-213ENST00000493627 DEPDC1BQ8WUY9 529 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 IRF7Q92985 503 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 CLDN23Q96B33 292 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 NELL2Q99435 816 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 HINFPQ9BQA5 517 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 TRMT61BQ9BVS5 477 aaKnown RBP9.89□□□□□ -0.83
NFIA-213ENST00000493627 CCSER1Q9C0I3 900 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 DNAJC25Q9H1X3 360 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 SLITRK6Q9H5Y7 841 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 MRPS17Q9Y2R5 130 aaKnown RBP9.89□□□□□ -0.83
NFIA-213ENST00000493627 EP300Q09472 2414 aaPredicted RBP9.89□□□□□ -0.83
NFIA-213ENST00000493627 DCHS1Q96JQ0 3298 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 TSC2P49815 1807 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 PATJQ8NI35 1801 aa9.89□□□□□ -0.83
NFIA-213ENST00000493627 FRYLO94915 3013 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 MYH11P35749 1972 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 COL4A2P08572 1712 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 A0A1W2PRU2 124 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 MTMR11A4FU01 709 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 SHISA7A6NL88 538 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 TISP43B9A030 160 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 SPTLC1O15269 473 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 KINO60870 393 aaKnown RBP9.88□□□□□ -0.83
NFIA-213ENST00000493627 VIPR2P41587 438 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 RPS9P46781 194 aaKnown RBP9.88□□□□□ -0.83
NFIA-213ENST00000493627 ID4P47928 161 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 ACOT2P49753 483 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 EPHB3P54753 998 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 LILRA4P59901 499 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 DUSP4Q13115 394 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 MYBPC2Q14324 1141 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 ZNF528Q3MIS6 628 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 ZC2HC1CQ53FD0 456 aaPredicted RBP9.88□□□□□ -0.83
NFIA-213ENST00000493627 C9orf57Q5W0N0 161 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 CENPPQ6IPU0 288 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 SFR1Q86XK3 245 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
NFIA-213ENST00000493627 OR10T2Q8NGX3 314 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 SENP8Q96LD8 212 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 LRRC3Q9BY71 257 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 ST6GALNAC4Q9H4F1 302 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 TRPV4Q9HBA0 871 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 ZNF334Q9HCZ1 680 aaPredicted RBP9.88□□□□□ -0.83
NFIA-213ENST00000493627 TRPV5Q9NQA5 729 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 NDRG2Q9UN36 371 aaKnown RBP9.88□□□□□ -0.83
NFIA-213ENST00000493627 DERAQ9Y315 318 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 C2CD2Q9Y426 696 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 PIAS3Q9Y6X2 628 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 GPR179Q6PRD1 2367 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 OTOGLQ3ZCN5 2332 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 DMXL1Q9Y485 3027 aa9.88□□□□□ -0.83
NFIA-213ENST00000493627 ANO9A1A5B4 782 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 HEPACAM2A8MVW5 462 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 PIRO00625 290 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 MAN2B1O00754 1011 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 CYP11A1P05108 521 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 PAX3P23760 479 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 ALDH1A3P47895 512 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 FOXK2Q01167 660 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 CSTF1Q05048 431 aaKnown RBP9.87□□□□□ -0.83
NFIA-213ENST00000493627 CUL4AQ13619 759 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 STXBP5Q5T5C0 1151 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 ADALQ6DHV7 355 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 ARMCX5Q6P1M9 558 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 USP49Q70CQ1 688 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 ZNF687Q8N1G0 1237 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 TTC9BQ8N6N2 239 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 SUMF1Q8NBK3 374 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 ATAD1Q8NBU5 361 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 RUBCNQ92622 972 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 HVCN1Q96D96 273 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 RSPRY1Q96DX4 576 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 EPSTI1Q96J88 318 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 TMEM209Q96SK2 561 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 GPR88Q9GZN0 384 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 ASB7Q9H672 318 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 PRMT8Q9NR22 394 aaPredicted RBP9.87□□□□□ -0.83
NFIA-213ENST00000493627 STK17AQ9UEE5 414 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 FBXO2Q9UK22 296 aaPredicted RBP9.87□□□□□ -0.83
NFIA-213ENST00000493627 AGO2Q9UKV8 859 aaKnown RBP9.87□□□□□ -0.83
NFIA-213ENST00000493627 SLC27A5Q9Y2P5 690 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 PCDHGA2Q9Y5H1 932 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 CLIC4Q9Y696 253 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 CACNA1AO00555 2505 aa9.87□□□□□ -0.83
NFIA-213ENST00000493627 ARNTLO00327 626 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 ZNF263O14978 683 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 PPP1R37O75864 691 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 SOAT2O75908 522 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 PDCP20941 246 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 DDIT3P35638 169 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 TXLNAP40222 546 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 TAF6P49848 677 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 MTAPQ13126 283 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 RESTQ13127 1097 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 FZD5Q13467 585 aa9.86□□□□□ -0.83
NFIA-213ENST00000493627 PTPAQ15257 358 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms