RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CEP104O60308 925 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 ERLIN1O75477 346 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 PAEPP09466 180 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 C1QBPQ07021 282 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 MYO1EQ12965 1108 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 ZNF394Q53GI3 561 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 UBXN11Q5T124 520 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 FAM228AQ86W67 206 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 TMEM130Q8N3G9 435 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 TTC39CQ8N584 583 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 UBL4BQ8N7F7 174 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 PCSK9Q8NBP7 692 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 TMEM35BQ8NCS4 154 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 ACTRT1Q8TDG2 376 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 RUBCNQ92622 972 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 VCPIP1Q96JH7 1222 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 RPS6KC1Q96S38 1066 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 TSPAN18Q96SJ8 248 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 PNKPQ96T60 521 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 APOL6Q9BWW8 343 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 SDCBP2Q9H190 292 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 CARD9Q9H257 536 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 ADAM22Q9P0K1 906 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 CNTN3Q9P232 1028 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 ANAPC7Q9UJX3 599 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 UBQLN1Q9UMX0 589 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 PCDHGC3Q9UN70 934 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 NOC2LQ9Y3T9 749 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 ALG6Q9Y672 507 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 SCINQ9Y6U3 715 aa9.74□□□□□ -0.85
SMARCC1-208ENST00000492896 SPOPO43791 374 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CILPO75339 1184 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 TRPA1O75762 1119 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 GNRH1P01148 92 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 MYCNP04198 464 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CALB1P05937 261 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 ASGR1P07306 291 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CFHP08603 1231 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CD19P15391 556 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 COMTP21964 271 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 RRM1P23921 792 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CTNNA2P26232 953 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 SSTR3P32745 418 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CDH5P33151 784 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CLUL1Q15846 466 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 KCNA10Q16322 511 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 MAP3K21Q5TCX8 1036 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 TWF2Q6IBS0 349 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 C8orf74Q6P047 294 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 WDR93Q6P2C0 686 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 MMS22LQ6ZRQ5 1243 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 RPAINQ86UA6 219 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 SERINC5Q86VE9 423 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 RASGEF1CQ8N431 466 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 LRRC52Q8N7C0 313 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 USP38Q8NB14 1042 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 C1orf131Q8NDD1 294 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 RAET1EQ8TD07 263 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 BTBD6Q96KE9 485 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 ZMAT2Q96NC0 199 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 ZSWIM1Q9BR11 485 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 ZNF518BQ9C0D4 1074 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 SENP6Q9GZR1 1112 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 WNT8AQ9H1J5 351 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 MRPL47Q9HD33 250 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 ARFGAP3Q9NP61 516 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 RBM12Q9NTZ6 932 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 TUBGCP4Q9UGJ1 667 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 PARP2Q9UGN5 583 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CHORDC1Q9UHD1 332 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 HES2Q9Y543 173 aa9.73□□□□□ -0.85
SMARCC1-208ENST00000492896 CCDC66A2RUB6 948 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 CCDC188H7C350 402 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 RPS6KA5O75582 802 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 CABYRO75952 493 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 CD4P01730 458 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 CTSHP09668 335 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 KCNE1P15382 129 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 ATF7P17544 494 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 MMP8P22894 467 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 AKAP5P24588 427 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 MAP2K2P36507 400 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 RAD23BP54727 409 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 CDH8P55286 799 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 VSNL1P62760 191 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 PTPN11Q06124 597 aaPredicted RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 MGAT3Q09327 533 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 PTP4A2Q12974 167 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 ZBTB6Q15916 424 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 MAP9Q49MG5 647 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 GLE1Q53GS7 698 aaKnown RBP9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 GLRA4Q5JXX5 417 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 SEL1L2Q5TEA6 688 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 DCAF12L1Q5VU92 463 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 C9orf57Q5W0N0 161 aa9.72□□□□□ -0.85
SMARCC1-208ENST00000492896 CCSAPQ6IQ19 270 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms