RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PPP3CAQ08209 521 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 SDHAF4Q5VUM1 108 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 SND1Q7KZF4 910 aaKnown RBP eCLIP4.76□□□□□ -1.658e-10■□□□□ 9.3
TRA2B-215ENST00000492417 PEX26Q7Z412 305 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 VSTM4Q8IW00 320 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 GIPC2Q8TF65 315 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 AUTS2Q8WXX7 1259 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 KAT5Q92993 513 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 DUSP9Q99956 384 aaKnown RBP4.76□□□□□ -1.65
TRA2B-215ENST00000492417 RABEP2Q9H5N1 569 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 ACP6Q9NPH0 428 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 APEX2Q9UBZ4 518 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 TUBGCP4Q9UGJ1 667 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 PCSK1NQ9UHG2 260 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 NUDT5Q9UKK9 219 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 HYOU1Q9Y4L1 999 aa4.76□□□□□ -1.65
TRA2B-215ENST00000492417 SMIM28A0A1B0GU29 152 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 LRRIQ3A6PVS8 624 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 KPNA7A9QM74 516 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 FOXN3O00409 490 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SLC16A3O15427 465 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 AP1G2O75843 785 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 OR4Q2P0C623 313 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SETSIPP0DME0 302 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MYL4P12829 197 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 GFPT1Q06210 699 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 KRT81Q14533 505 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 PPP6R3Q5H9R7 873 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MDH1BQ5I0G3 518 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 HYIQ5T013 277 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 FAM102AQ5T9C2 384 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 USP38Q8NB14 1042 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 GPR152Q8TDT2 470 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 LRRC15Q8TF66 581 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 TMEM40Q8WWA1 233 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MRFAP1L1Q96HT8 127 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MKNK1Q9BUB5 465 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 PLVAPQ9BX97 442 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MRPL9Q9BYD2 267 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 PDZD7Q9H5P4 517 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SLC27A5Q9Y2P5 690 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ECM29Q5VYK3 1845 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 A0A1B0GUL6 1792 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 FSD2A1L4K1 749 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ARHGAP6O43182 974 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CEP104O60308 925 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ADAMTS4O75173 837 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CXCL14O95715 111 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 DYNLT1P63172 113 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 LPIN1Q14693 890 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CLUL1Q15846 466 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 LRRC26Q2I0M4 334 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CBWD6Q4V339 395 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CBWD3Q5JTY5 395 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CBWD5Q5RIA9 395 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CFAP58Q5T655 872 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 BTBD8Q5XKL5 378 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 PPP2R2DQ66LE6 453 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ZNF280DQ6N043 979 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MIB1Q86YT6 1006 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 DCP1BQ8IZD4 617 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 HS6ST3Q8IZP7 471 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ST13P5Q8NFI4 369 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SECISBP2LQ93073 1101 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CYFIP2Q96F07 1278 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 HINFPQ9BQA5 517 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MAF1Q9H063 256 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ASB7Q9H672 318 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ZWILCHQ9H900 591 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 NHEJ1Q9H9Q4 299 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ARHGAP28Q9P2N2 729 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CNOT8Q9UFF9 292 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 PAPPA2Q9BXP8 1791 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MEIS3P2A8K0S8 358 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 EDIL3O43854 480 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ATG7O95352 703 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 IFNB1P01574 187 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 IQCF3P0C7M6 154 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 PCK1P35558 622 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ARHGAP25P42331 645 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 GJA8P48165 433 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SARSP49591 514 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 KIF11P52732 1056 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 VAV2P52735 878 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 NCKAP1LP55160 1127 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MAP3K7CLP57077 242 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 MAPK7Q13164 816 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CUL2Q13617 745 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SEPT6Q14141 434 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 PPP2R5DQ14738 602 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ERCC6LQ2NKX8 1250 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SLC39A12Q504Y0 691 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 BSPRYQ5W0U4 402 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 RWDD4Q6NW29 188 aaKnown RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 TRIM65Q6PJ69 517 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CHRDL2Q6WN34 429 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.75□□□□□ -1.65
TRA2B-215ENST00000492417 SERINC5Q86VE9 423 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 WDR49Q8IV35 697 aa4.75□□□□□ -1.65
TRA2B-215ENST00000492417 CD302Q8IX05 232 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms