RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NIFKQ9BYG3 293 aaKnown RBP13.21□□□□□ -0.29
HMGN1-220ENST00000492280 IMPG2Q9BZV3 1241 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 CAPN7Q9Y6W3 813 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 KAT6AQ92794 2004 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 SOCS7O14512 581 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 HGSO14964 777 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-220ENST00000492280 MAFO75444 373 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-220ENST00000492280 ASS1P00966 412 aaKnown RBP13.21□□□□□ -0.29
HMGN1-220ENST00000492280 NRLP54845 237 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 AUHQ13825 339 aaKnown RBP13.21□□□□□ -0.29
HMGN1-220ENST00000492280 BYSLQ13895 437 aaKnown RBP13.21□□□□□ -0.29
HMGN1-220ENST00000492280 METTL7BQ6UX53 244 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 GPC2Q8N158 579 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 ANKRD42Q8N9B4 389 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 GPR20Q99678 358 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 TSPYL1Q9H0U9 437 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 KIAA1586Q9HCI6 787 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 AVENQ9NQS1 362 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-220ENST00000492280 NRBP2Q9NSY0 501 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
HMGN1-220ENST00000492280 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.3
HMGN1-220ENST00000492280 H0YCG3 227 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 STAM2O75886 525 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 KRT1P04264 644 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 CYP2C8P10632 490 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 ATF2P15336 505 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 SLFN12LQ6IEE8 588 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 DCUN1D2Q6PH85 259 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 XPO6Q96QU8 1125 aaKnown RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 CYTH4Q9UIA0 394 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 TRIP11Q15643 1979 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 GOLGA8MH3BSY2 632 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 GH1P01241 217 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 PIGRP01833 764 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 HOXC6P09630 235 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 TMEM191BP0C7N4 346 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 DRG2P55039 364 aaKnown RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 MCCD1P59942 119 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 KLF1Q13351 362 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 FASTKD3Q14CZ7 662 aaKnown RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 ZNF699Q32M78 642 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 EMC10Q5UCC4 262 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 CPLX4Q7Z7G2 160 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 WDTC1Q8N5D0 677 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 CPB2Q96IY4 423 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 TWNKQ96RR1 684 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 MRPL4Q9BYD3 311 aaKnown RBP13.2□□□□□ -0.3
HMGN1-220ENST00000492280 RNPEPQ9H4A4 650 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
HMGN1-220ENST00000492280 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 LRRD1A4D1F6 860 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 TOM1L1O75674 476 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 KIAA0754O94854 1291 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 NFICP08651 508 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 RARGP13631 454 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 EDNRBP24530 442 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 GAD2Q05329 585 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 TRPC3Q13507 836 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 MAPK6Q16659 721 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 P3H1Q32P28 736 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 RAB6CQ53S08 254 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 FAM160B1Q5W0V3 765 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 PLEKHA7Q6IQ23 1121 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 DENND1BQ6P3S1 775 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 RHOT1Q8IXI2 618 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 OTUD6BQ8N6M0 293 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 JOSD2Q8TAC2 188 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 GDAP1Q8TB36 358 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 SNF8Q96H20 258 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 RAB6CQ9H0N0 254 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 ANK1P16157 1881 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 ABLIM1O14639 778 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 MEFVO15553 781 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 IFNB1P01574 187 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 EIF3BP55884 814 aaKnown RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 BPIFB4P59827 614 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 NEDD9Q14511 834 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 IZUMO3Q5VZ72 239 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 DNAJC24Q6P3W2 148 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 LRRC34Q8IZ02 419 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 FEZF2Q8TBJ5 459 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms