RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ANP32EQ9BTT0 268 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 IKZF4Q9H2S9 585 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 TMEM206Q9H813 350 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 RMND1Q9NWS8 449 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 MRPS23Q9Y3D9 190 aaKnown RBP11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 MTF2Q9Y483 593 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 NUB1Q9Y5A7 615 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 INSL5Q9Y5Q6 135 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 CACNA1IQ9P0X4 2223 aa11.96□□□□□ -0.49
TMEM39A-211ENST00000491685 OBSL1O75147 1896 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 KIF26AQ9ULI4 1882 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 TTC26A0AVF1 554 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 K7ENM7 598 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 ACTN4O43707 911 aaKnown RBP11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 GADD45BO75293 160 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 OR4Q2P0C623 313 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 ATF2P15336 505 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 RPL9P32969 192 aaKnown RBP11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 MATR3P43243 847 aaKnown RBP eCLIP11.95□□□□□ -0.52e-8■■■□□ 15.9
TMEM39A-211ENST00000491685 ZNF131P52739 623 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 STARD6P59095 220 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 CTXN3Q4LDR2 81 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 SLFN12LQ6IEE8 588 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 SLC39A4Q6P5W5 647 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 MTSS1LQ765P7 747 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 ZNF720Q7Z2F6 126 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 HS6ST3Q8IZP7 471 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 SYCP3Q8IZU3 236 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 ENGASEQ8NFI3 743 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 PJA1Q8NG27 643 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 DNAJC19Q96DA6 116 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 RMDN1Q96DB5 314 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 FIZ1Q96SL8 496 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 CORO1BQ9BR76 489 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 BLZF1Q9H2G9 400 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 SEMA4AQ9H3S1 761 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 GOLPH3LQ9H4A5 285 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 CYP4F11Q9HBI6 524 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 EXOC1Q9NV70 894 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 TIMM13Q9Y5L4 95 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 R4GN57 208 aa11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 EP300Q09472 2414 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-211ENST00000491685 SHISA7A6NL88 538 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 LACTBL1A8MY62 500 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 TISP43B9A030 160 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 PRRG1O14668 218 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 CLDN3O15551 220 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 MOSPD3O75425 235 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 GCNT3O95395 438 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 LRG1P02750 347 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 GJA1P17302 382 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 CD72P21854 359 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 LRPAP1P30533 357 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 CUL4BQ13620 913 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 POSTNQ15063 836 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 MLF2Q15773 248 aaPredicted RBP11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 ZBTB6Q15916 424 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 ENOX2Q16206 610 aaKnown RBP11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 TANGO2Q6ICL3 276 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 ZNF280DQ6N043 979 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 RNF19BQ6ZMZ0 732 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 DGLUCYQ7Z3D6 616 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 TCEAL8Q8IYN2 117 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 MAML2Q8IZL2 1156 aaPredicted RBP11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 HVCN1Q96D96 273 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 KIF12Q96FN5 646 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 BICD1Q96G01 975 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 ZSWIM3Q96MP5 696 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 GSDMAQ96QA5 445 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 ACCSQ96QU6 501 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 DDX23Q9BUQ8 820 aaKnown RBP11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 ST6GALNAC4Q9H4F1 302 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 OLFML3Q9NRN5 406 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 CEP72Q9P209 647 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 TBX20Q9UMR3 447 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 SIT1Q9Y3P8 196 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 DENND4CQ5VZ89 1909 aa11.94□□□□□ -0.5
TMEM39A-211ENST00000491685 EPG5Q9HCE0 2579 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 H7C4K7 107 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 M0QZQ0 153 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 HNRNPDLO14979 420 aaKnown RBP11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 MBD3O95983 291 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 PIGRP01833 764 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 NFICP08651 508 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 PTPN2P17706 415 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 NMT1P30419 496 aaKnown RBP11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 ELF1P32519 619 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 AARSP49588 968 aaKnown RBP eCLIP11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 LIG4P49917 911 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 GTF2BQ00403 316 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 ADCY1Q08828 1119 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 TWF1Q12792 350 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 GRM2Q14416 872 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 KYAT1Q16773 422 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 SLC44A4Q53GD3 710 aa11.93□□□□□ -0.5
TMEM39A-211ENST00000491685 SFR1Q86XK3 245 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms