RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MAN2A1Q16706 1144 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 AGAP9Q5VTM2 703 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 FAM180BQ6P0A1 224 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 CLEC14AQ86T13 490 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 TPH2Q8IWU9 490 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 LGI4Q8N135 537 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 ZNF713Q8N859 430 aaPredicted RBP5.35□□□□□ -1.55
RTN4-215ENST00000491592 OR14K1Q8NGZ2 314 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 PARD3BQ8TEW8 1205 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 LPPQ93052 612 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 SLC7A6OSQ96CW6 309 aaPredicted RBP5.35□□□□□ -1.55
RTN4-215ENST00000491592 BORCS6Q96GS4 357 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 TEKT5Q96M29 485 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 NELL2Q99435 816 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 FAM167BQ9BTA0 163 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 ACE2Q9BYF1 805 aaPredicted RBP5.35□□□□□ -1.55
RTN4-215ENST00000491592 OSBPL6Q9BZF3 934 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 ATP6V0A4Q9HBG4 840 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 TCF7L1Q9HCS4 588 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 DDX21Q9NR30 783 aaKnown RBP eCLIP5.35□□□□□ -1.55
RTN4-215ENST00000491592 SMYD2Q9NRG4 433 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 TRMT13Q9NUP7 481 aaKnown RBP5.35□□□□□ -1.55
RTN4-215ENST00000491592 ARGLU1Q9NWB6 273 aaPredicted RBP5.35□□□□□ -1.55
RTN4-215ENST00000491592 NKIRAS2Q9NYR9 191 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 TPCN1Q9ULQ1 816 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 SMC3Q9UQE7 1217 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 PCDHGA9Q9Y5G4 932 aaKnown RBP5.35□□□□□ -1.55
RTN4-215ENST00000491592 PCDHGA8Q9Y5G5 932 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 PCDHGA7Q9Y5G6 932 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 PCDHGA6Q9Y5G7 932 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 PCDHGA3Q9Y5H0 932 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 PCDHGA2Q9Y5H1 932 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 MRFAP1Q9Y605 127 aa5.35□□□□□ -1.55
RTN4-215ENST00000491592 KIAA0556O60303 1618 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 ADAMTS12P58397 1594 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 SYNJ2O15056 1496 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 C9orf84Q5VXU9 1444 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 PDS5BQ9NTI5 1447 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 ANKRD18BA2A2Z9 1011 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 IPO5O00410 1097 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 PES1O00541 588 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 TMEM127O75204 238 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 LY86O95711 162 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 CCDC159P0C7I6 412 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 GAAP10253 952 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 CAPN3P20807 821 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 CCND1P24385 295 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 KRT20P35900 424 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 MEF2AQ02078 507 aaPredicted RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 CD69Q07108 199 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 NFYCQ13952 458 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 GRM3Q14832 879 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 PLCB4Q15147 1175 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 PTPN14Q15678 1187 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 ADRM1Q16186 407 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 RNF151Q2KHN1 245 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 ANO4Q32M45 955 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 VPS53Q5VIR6 699 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 XRRA1Q6P2D8 792 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 ZNF449Q6P9G9 518 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 CLEC17AQ6ZS10 378 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 USP30Q70CQ3 517 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 FASTKD5Q7L8L6 764 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 SAMD14Q8IZD0 417 aaPredicted RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 PIK3C3Q8NEB9 887 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 JADE3Q92613 823 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 HDAC2Q92769 488 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 N4BP2L2Q92802 583 aaPredicted RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 GCDHQ92947 438 aaPredicted RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 UIMC1Q96RL1 719 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 PAIP2Q9BPZ3 127 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 PANK2Q9BZ23 570 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 C22orf23Q9BZE7 217 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 DHX36Q9H2U1 1008 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 C14orf93Q9H972 538 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 BLOC1S4Q9NUP1 217 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 RABL2BQ9UNT1 228 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 NR2E1Q9Y466 385 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 PCDHGB3Q9Y5G1 929 aa5.34□□□□□ -1.55
RTN4-215ENST00000491592 RBM8AQ9Y5S9 174 aaKnown RBP5.34□□□□□ -1.55
RTN4-215ENST00000491592 TARBP1Q13395 1621 aaKnown RBP5.34□□□□□ -1.56
RTN4-215ENST00000491592 ATP10AO60312 1499 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 WDR7Q9Y4E6 1490 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 NCOA3Q9Y6Q9 1424 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 ADAMTS20P59510 1910 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 DISP3Q9P2K9 1392 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 A0A1W2PR48 441 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 TRIM64A6NGJ6 449 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 TRIM64BA6NI03 449 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 GLULP15104 373 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 ZKSCAN1P17029 563 aaPredicted RBP5.33□□□□□ -1.56
RTN4-215ENST00000491592 ATF7P17544 494 aaPredicted RBP5.33□□□□□ -1.56
RTN4-215ENST00000491592 VCAM1P19320 739 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 C5AR1P21730 350 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 MSNP26038 577 aaKnown RBP5.33□□□□□ -1.56
RTN4-215ENST00000491592 CNR2P34972 360 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 COPAP53621 1224 aa5.33□□□□□ -1.56
RTN4-215ENST00000491592 CLNS1AP54105 237 aaKnown RBP5.33□□□□□ -1.56
RTN4-215ENST00000491592 NAP1L1P55209 391 aaKnown RBP5.33□□□□□ -1.56
RTN4-215ENST00000491592 HGFACQ04756 655 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms