RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 SPIRE2Q8WWL2 714 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 DDX1Q92499 740 aaKnown RBP22.49■■□□□ 1.19
CLIP2-208ENST00000491075 LLPHQ9BRT6 129 aaKnown RBP22.49■■□□□ 1.19
CLIP2-208ENST00000491075 ASB3Q9Y575 518 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 TSC2P49815 1807 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 SPAG17Q6Q759 2223 aa22.49■■□□□ 1.19
CLIP2-208ENST00000491075 DPYSL4O14531 572 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 CLDN3O15551 220 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 FGF19O95750 216 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 OR4Q2P0C623 313 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 GUCY2CP25092 1073 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 HOXA6P31267 233 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 AARSP49588 968 aaKnown RBP eCLIP22.48■■□□□ 1.19
CLIP2-208ENST00000491075 MCL1Q07820 350 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 DUSP4Q13115 394 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 NBR1Q14596 966 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 WDR44Q5JSH3 913 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 HEATR6Q6AI08 1181 aaKnown RBP22.48■■□□□ 1.19
CLIP2-208ENST00000491075 HAUS6Q7Z4H7 955 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 CRISPLD1Q9H336 500 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 OBP2AQ9NY56 170 aa22.48■■□□□ 1.19
CLIP2-208ENST00000491075 TIMM13Q9Y5L4 95 aaPredicted RBP22.48■■□□□ 1.19
CLIP2-208ENST00000491075 LAD1O00515 517 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 CLTAP09496 248 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 CYP3A5P20815 502 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 SMTNP53814 917 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 STXBP5Q5T5C0 1151 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 TXNDC11Q6PKC3 985 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 CEP68Q76N32 757 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 CCDC83Q8IWF9 413 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 SYNPOQ8N3V7 929 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 FAM160A2Q8N612 972 aaPredicted RBP22.47■■□□□ 1.19
CLIP2-208ENST00000491075 TMEM161BQ8NDZ6 487 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 KIF12Q96FN5 646 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 UBQLN1Q9UMX0 589 aaKnown RBP22.47■■□□□ 1.19
CLIP2-208ENST00000491075 USP24Q9UPU5 2620 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 ANK1P16157 1881 aa22.47■■□□□ 1.19
CLIP2-208ENST00000491075 TTC26A0AVF1 554 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 SFI1A8K8P3 1242 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 PP2D1A8MPX8 630 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 XPOTO43592 962 aaKnown RBP22.46■■□□□ 1.19
CLIP2-208ENST00000491075 GDF9O60383 454 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 MAPTP10636 758 aaKnown RBP22.46■■□□□ 1.19
CLIP2-208ENST00000491075 PLS3P13797 630 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 MATR3P43243 847 aaKnown RBP eCLIP22.46■■□□□ 1.19
CLIP2-208ENST00000491075 HMGN5P82970 282 aaKnown RBP22.46■■□□□ 1.19
CLIP2-208ENST00000491075 CCINQ13939 588 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 MYBPC2Q14324 1141 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 ARHGAP15Q53QZ3 475 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 CENPPQ6IPU0 288 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 DSTYKQ6XUX3 929 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 WDR5BQ86VZ2 330 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 PSMG2Q969U7 264 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 MKNK1Q9BUB5 465 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 GTSE1Q9NYZ3 720 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 LIMCH1Q9UPQ0 1083 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 CFAP47Q6ZTR5 3102 aa22.46■■□□□ 1.19
CLIP2-208ENST00000491075 MTMR11A4FU01 709 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 TYMPP19971 482 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 PLCB2Q00722 1185 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 PPP2R3AQ06190 1150 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 SPAG1Q07617 926 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 PON2Q15165 354 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 ZBTB6Q15916 424 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 OVOS1Q6IE37 1185 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 GAREM2Q75VX8 874 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 KCNK18Q7Z418 384 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 ITIH5Q86UX2 942 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 ZFYVE19Q96K21 471 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 ATXN3LQ9H3M9 355 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 HSFX1Q9UBD0 423 aa22.45■■□□□ 1.18
CLIP2-208ENST00000491075 GABRR2P28476 465 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 PRPHP41219 470 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 LIMK1P53667 647 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 KYAT1Q16773 422 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 GPR158Q5T848 1215 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 IL31Q6EBC2 164 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 DNAJB7Q7Z6W7 309 aaPredicted RBP22.44■■□□□ 1.18
CLIP2-208ENST00000491075 TMEM130Q8N3G9 435 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 CHAMP1Q96JM3 812 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 LRRC3BQ96PB8 259 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 TSPAN18Q96SJ8 248 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 C2orf42Q9NWW7 574 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 SLC27A5Q9Y2P5 690 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 PCDHB6Q9Y5E3 794 aa22.44■■□□□ 1.18
CLIP2-208ENST00000491075 DENND4CQ5VZ89 1909 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 ZFHX4Q86UP3 3567 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 H0YCG3 227 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 ODC1P11926 461 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 U2AF2P26368 475 aaKnown RBP eCLIP22.43■■□□□ 1.18
CLIP2-208ENST00000491075 WEE1P30291 646 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 CDC25AP30304 524 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 TOB1P50616 345 aaPredicted RBP22.43■■□□□ 1.18
CLIP2-208ENST00000491075 RAD51AP2Q09MP3 1159 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 AASDHQ4L235 1098 aaPredicted RBP22.43■■□□□ 1.18
CLIP2-208ENST00000491075 ARMCX5Q6P1M9 558 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 DTHD1Q6ZMT9 781 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 GPIHBP1Q8IV16 184 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 FAM184AQ8NB25 1140 aa22.43■■□□□ 1.18
CLIP2-208ENST00000491075 ATAD1Q8NBU5 361 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms