RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 PPP1R2P41236 205 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 VAMP7P51809 220 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
C9orf43-203ENST00000490544 DLG4P78352 724 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 TRPC3Q13507 836 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 NFIL3Q16649 462 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 LIN9Q5TKA1 542 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 CENPPQ6IPU0 288 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 CES5AQ6NT32 575 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 SYCE2Q6PIF2 218 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 RSPO2Q6UXX9 243 aaPredicted RBP16.69■□□□□ 0.26
C9orf43-203ENST00000490544 LRRC52Q8N7C0 313 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 PARD3BQ8TEW8 1205 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 DHTKD1Q96HY7 919 aaPredicted RBP16.69■□□□□ 0.26
C9orf43-203ENST00000490544 HPDLQ96IR7 371 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 DPP7Q9UHL4 492 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 CDH22Q9UJ99 828 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 FBXL5Q9UKA1 691 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 USP15Q9Y4E8 981 aaPredicted RBP16.69■□□□□ 0.26
C9orf43-203ENST00000490544 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 BACE2Q9Y5Z0 518 aa16.69■□□□□ 0.26
C9orf43-203ENST00000490544 HUS1O60921 280 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 PAX3P23760 479 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 CCNE1P24864 410 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 STX17P56962 302 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 ROR1Q01973 937 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 LRRC63Q05C16 580 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 WSCD1Q658N2 575 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 INTS8Q75QN2 995 aaKnown RBP16.68■□□□□ 0.26
C9orf43-203ENST00000490544 TRIML1Q8N9V2 468 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 ZNF516Q92618 1163 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 DSEQ9UL01 958 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 ARIH1Q9Y4X5 557 aaPredicted RBP16.68■□□□□ 0.26
C9orf43-203ENST00000490544 C5orf42Q9H799 3197 aa16.68■□□□□ 0.26
C9orf43-203ENST00000490544 DENND4AQ7Z401 1863 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 BICDL2A1A5D9 508 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 PPP1R3GB7ZBB8 358 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 RFPL2O75678 378 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 OR4Q2P0C623 313 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 BMP1P13497 986 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 TYMPP19971 482 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 CDR1P51861 262 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 FKBP3Q00688 224 aaKnown RBP16.67■□□□□ 0.26
C9orf43-203ENST00000490544 PAK1Q13153 545 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 RAB33AQ14088 237 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 DCAF17Q5H9S7 520 aaPredicted RBP16.67■□□□□ 0.26
C9orf43-203ENST00000490544 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
C9orf43-203ENST00000490544 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 PGLYRP2Q96PD5 576 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 MMS19Q96T76 1030 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
C9orf43-203ENST00000490544 PIDD1Q9HB75 910 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 FBXW11Q9UKB1 542 aa16.67■□□□□ 0.26
C9orf43-203ENST00000490544 CCDC195A0A1B0GUA6 201 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 WDR27A2RRH5 827 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 PRRG1O14668 218 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 MAPK13O15264 365 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 OAZ2O95190 189 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 C8AP07357 584 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 SP100P23497 879 aaPredicted RBP16.66■□□□□ 0.26
C9orf43-203ENST00000490544 ELF1P32519 619 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 AP3M2P53677 418 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 MYL6P60660 151 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 TNNC1P63316 161 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 ITIH3Q06033 890 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 MRPL58Q14197 206 aaKnown RBP16.66■□□□□ 0.26
C9orf43-203ENST00000490544 PPM1LQ5SGD2 360 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 TCERG1LQ5VWI1 586 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 SLC8B1Q6J4K2 584 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 THEM5Q8N1Q8 247 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 CXorf38Q8TB03 319 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 SLC7A14Q8TBB6 771 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 FEZF2Q8TBJ5 459 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 PLEKHA4Q9H4M7 779 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.26
C9orf43-203ENST00000490544 NXF1Q9UBU9 619 aaKnown RBP16.66■□□□□ 0.26
C9orf43-203ENST00000490544 L1RE1Q9UN81 338 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 POLIQ9UNA4 740 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 NCOR1O75376 2440 aa16.66■□□□□ 0.26
C9orf43-203ENST00000490544 OR6C75A6NL08 312 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 MBD3O95983 291 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 CST3P01034 146 aaPredicted RBP16.65■□□□□ 0.26
C9orf43-203ENST00000490544 GCLMP48507 274 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 NCOA4Q13772 614 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 CBX2Q14781 532 aaPredicted RBP16.65■□□□□ 0.26
C9orf43-203ENST00000490544 SMAD2Q15796 467 aaKnown RBP16.65■□□□□ 0.26
C9orf43-203ENST00000490544 ZNF699Q32M78 642 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 CCDC40Q4G0X9 1142 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 LILRA6Q6PI73 481 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 ADGRF2Q8IZF7 708 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 ELMO3Q96BJ8 720 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
C9orf43-203ENST00000490544 RIPOR3Q96MK2 946 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms