RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 KLF1Q13351 362 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 SEPT2Q15019 361 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 PLEKHG6Q3KR16 790 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 MUM1L1Q5H9M0 696 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 FAM47AQ5JRC9 791 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 MBNL2Q5VZF2 373 aaKnown RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 METRNLQ641Q3 311 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 DRICH1Q6PGQ1 229 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 SLC4A10Q6U841 1118 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 ZNF572Q7Z3I7 529 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 LDLRAD3Q86YD5 345 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 RPUSD2Q8IZ73 545 aaKnown RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 AMER2Q8N7J2 671 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 OR10H5Q8NGA6 315 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 NEU1Q99519 415 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 TMX1Q9H3N1 280 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 BCO1Q9HAY6 547 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 ZNF277Q9NRM2 450 aaPredicted RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 ZBTB40Q9NUA8 1239 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 MIS18AQ9NYP9 233 aa3.45□□□□□ -1.86
CALD1-221ENST00000489019 EIF2B4Q9UI10 523 aaKnown RBP3.45□□□□□ -1.86
CALD1-221ENST00000489019 ABCC4O15439 1325 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PTPRCP08575 1304 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 IGSF1Q8N6C5 1336 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 SSH2Q76I76 1423 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 NALCNQ8IZF0 1738 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PEAK1Q9H792 1746 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PIK3C2AO00443 1686 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 ZNF142P52746 1687 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 RTL1A6NKG5 1358 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 KIF24Q5T7B8 1368 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 KIAA0232Q92628 1395 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 MAP3K5Q99683 1374 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 TRIM75PA6NK02 468 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 HTATSF1O43719 755 aaKnown RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 NCR1O76036 304 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 RECQL4O94761 1208 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 S100BP04271 92 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 GSPT1P15170 499 aaKnown RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 ZSCAN20P17040 1043 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 ATF3P18847 181 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 FPR1P21462 350 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 ECHS1P30084 290 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PTGS2P35354 604 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 SLC5A3P53794 718 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 RNASE9P60153 205 aaKnown RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 NUCB1Q02818 461 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 MGAT2Q10469 447 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 MTMR1Q13613 665 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 NOMO1Q15155 1222 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 KRT24Q2M2I5 525 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PLEKHO1Q53GL0 409 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 C1orf141Q5JVX7 400 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 FAM102AQ5T9C2 384 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 CCDC30Q5VVM6 783 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 AFMIDQ63HM1 303 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PCSK4Q6UW60 755 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PDZD4Q76G19 769 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 GDF7Q7Z4P5 450 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 NECAB2Q7Z6G3 386 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 CHD1LQ86WJ1 897 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 ULK2Q8IYT8 1036 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PQLC1Q8N2U9 271 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 C1orf162Q8NEQ5 155 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 STON2Q8WXE9 905 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 TFAP2CQ92754 450 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 HAS1Q92839 578 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 LENG9Q96B70 501 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 MENTQ9BUN1 341 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 PUS7LQ9H0K6 701 aaKnown RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 CCDC8Q9H0W5 538 aaPredicted RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 IKZF4Q9H2S9 585 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 LDAHQ9H6V9 325 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 DDX56Q9NY93 547 aaKnown RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 TRPM5Q9NZQ8 1165 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 CHPF2Q9P2E5 772 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 GPR45Q9Y5Y3 372 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 HS3ST4Q9Y661 456 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 CHD2O14647 1828 aaKnown RBP3.44□□□□□ -1.86
CALD1-221ENST00000489019 ADGRL3Q9HAR2 1447 aa3.44□□□□□ -1.86
CALD1-221ENST00000489019 ADAMTSL3P82987 1691 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 VIRMAQ69YN4 1812 aaKnown RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 DRGXA6NNA5 263 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 FZD9O00144 591 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 PJA2O43164 708 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 PCDHGA12O60330 932 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 LPXNO60711 386 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 HMMRO75330 724 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 ITGB1P05556 798 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 EIF2S2P20042 333 aaKnown RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 PCSK1P29120 753 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 ALDH1A3P47895 512 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 CCT4P50991 539 aaKnown RBP3.43□□□□□ -1.86
CALD1-221ENST00000489019 CLRN1P58418 232 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 EVA1CP58658 441 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 TGFB2P61812 414 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 DPTQ07507 201 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 TEFQ10587 303 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 SP140Q13342 867 aa3.43□□□□□ -1.86
CALD1-221ENST00000489019 TAF7Q15545 349 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms