RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 TLR10Q9BXR5 811 aa5.87□□□□□ -1.47
CTNNB1-215ENST00000488914 TMX1Q9H3N1 280 aa5.87□□□□□ -1.47
CTNNB1-215ENST00000488914 KCTD5Q9NXV2 234 aa5.87□□□□□ -1.47
CTNNB1-215ENST00000488914 TUBD1Q9UJT1 453 aa5.87□□□□□ -1.47
CTNNB1-215ENST00000488914 PCDHA13Q9Y5I0 950 aa5.87□□□□□ -1.47
CTNNB1-215ENST00000488914 WASHC2AQ641Q2 1341 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 LRRC3CA6NJW4 275 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 IFRD1O00458 451 aaPredicted RBP5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 LDHAP00338 332 aaKnown RBP5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 FAM200BP0CF97 657 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 CTXN1P60606 82 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 MRPS35P82673 323 aaKnown RBP5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 CLUL1Q15846 466 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 MAP9Q49MG5 647 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 DACT2Q5SW24 774 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 ARHGEF25Q86VW2 580 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 CBARPQ8N350 705 aaPredicted RBP5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 CNTD1Q8N815 330 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 PRPF38AQ8NAV1 312 aaKnown RBP5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 PNKPQ96T60 521 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 C11orf54Q9H0W9 315 aaPredicted RBP5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 MANSC1Q9H8J5 431 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 IL17RBQ9NRM6 502 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 PRKAB1Q9Y478 270 aa5.86□□□□□ -1.47
CTNNB1-215ENST00000488914 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 ALAS1P13196 640 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 IARSP41252 1262 aaKnown RBP5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 SF3B3Q15393 1217 aaKnown RBP5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 INAVAQ3KP66 663 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 FLYWCH1Q4VC44 716 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 ODR4Q5SWX8 454 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 SP5Q6BEB4 398 aaPredicted RBP5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 DDX42Q86XP3 938 aaKnown RBP eCLIP5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 LNX2Q8N448 690 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 ACTRT2Q8TDY3 377 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 JADE3Q92613 823 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 KLK15Q9H2R5 256 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 ZHX3Q9H4I2 956 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 SEMA4GQ9NTN9 838 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 LRIT1Q9P2V4 623 aa5.85□□□□□ -1.47
CTNNB1-215ENST00000488914 TRIM75PA6NK02 468 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 AGFG2O95081 481 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 C5AR1P21730 350 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 WASP42768 502 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 ELLP55199 621 aaPredicted RBP5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 CREMQ03060 361 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 PGM2L1Q6PCE3 622 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 SAMD3Q8N6K7 520 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 NSUN7Q8NE18 718 aaKnown RBP5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 ZNF384Q8TF68 577 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 TMX3Q96JJ7 454 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 SPATA5L1Q9BVQ7 753 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 ABCF2Q9UG63 623 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 SLC45A2Q9UMX9 530 aa5.84□□□□□ -1.47
CTNNB1-215ENST00000488914 TRGV11A0A075B6L2 103 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 TCERG1O14776 1098 aaKnown RBP5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 KIF3BO15066 747 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 GRM6O15303 877 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 PCDHGA12O60330 932 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 NDUFS2O75306 463 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 GATA3P23771 443 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 CACNA2D1P54289 1103 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 ZNF280AP59817 542 aaPredicted RBP5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 IL10RAQ13651 578 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 KCTD2Q14681 263 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 UTP14CQ5TAP6 766 aaKnown RBP5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 COLGALT2Q8IYK4 626 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 IFI44Q8TCB0 444 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 TMEM125Q96AQ2 219 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 ASB6Q9NWX5 421 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 SLC5A4Q9NY91 659 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 LIMCH1Q9UPQ0 1083 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 PCDHGA9Q9Y5G4 932 aaKnown RBP5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 PCDHGA8Q9Y5G5 932 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 PCDHGA7Q9Y5G6 932 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 PCDHGA6Q9Y5G7 932 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 PCDHGA3Q9Y5H0 932 aa5.83□□□□□ -1.48
CTNNB1-215ENST00000488914 HAUS5O94927 633 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 MT-CO1P00395 513 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 LDHCP07864 332 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 EDNRBP24530 442 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 GNALP38405 381 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 AMPD3Q01432 767 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 C3orf36Q3SXR2 165 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 CCDC184Q52MB2 194 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 PAF1Q8N7H5 531 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 C1orf162Q8NEQ5 155 aaPredicted RBP5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 SLC39A13Q96H72 371 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 LRIG1Q96JA1 1093 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 KLHL32Q96NJ5 620 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 MED15Q96RN5 788 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 MPHOSPH6Q99547 160 aaKnown RBP5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 TDP1Q9NUW8 608 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 CWC25Q9NXE8 425 aaPredicted RBP5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 NOL7Q9UMY1 257 aaKnown RBP5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 CDYLQ9Y232 598 aa5.82□□□□□ -1.48
CTNNB1-215ENST00000488914 RBMXL2O75526 392 aaKnown RBP5.81□□□□□ -1.48
CTNNB1-215ENST00000488914 FAM163BP0C2L3 166 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms