RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 SCARA5Q6ZMJ2 495 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 NRG4Q8WWG1 115 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 ZBTB45Q96K62 511 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 PRMT6Q96LA8 375 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 TRIM56Q9BRZ2 755 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 CADM1Q9BY67 442 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 GLT8D2Q9H1C3 349 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 PCDHB4Q9Y5E5 795 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 E2F8A0AVK6 867 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 ACSBG2Q5FVE4 666 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 CROCCP2Q86T23 111 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 ALYREFQ86V81 257 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 CCDC89Q8N998 374 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 SCG3Q8WXD2 468 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 NYAP2Q9P242 653 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 PCSK1NQ9UHG2 260 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 RREB1Q92766 1687 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 FAM237BA0A1B0GVD1 139 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 TCRBV7S3A2A0A539 114 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 AVILO75366 819 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 CCNB1P14635 433 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 GNAZP19086 355 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 NEK3P51956 506 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 GDF10P55107 478 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 NR1H3Q13133 447 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 CLEC16AQ2KHT3 1053 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 PPP1R15BQ5SWA1 713 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 FAXCQ5TGI0 409 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 LDHDQ86WU2 507 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 C7orf43Q8WVR3 580 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 DDX1Q92499 740 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 KIFAP3Q92845 792 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 FAM111AQ96PZ2 611 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 CORO1CQ9ULV4 474 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 NVLO15381 856 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 EDF1O60869 148 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 GGPS1O95749 300 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 ENO1P06733 434 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 BGNP21810 368 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 AMPD1P23109 780 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 CIITAP33076 1130 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 C3orf62Q6ZUJ4 267 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 CTAGE3PQ8IX95 158 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 USP6NLQ92738 828 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 FAM161BQ96MY7 647 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 MCEEQ96PE7 176 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 TOP3BO95985 862 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 GZMAP12544 262 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 RASSF2P50749 326 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 IRX1P78414 480 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 SLC30A9Q6PML9 568 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 RINLQ6ZS11 566 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 C10orf82Q8WW14 230 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 SLC13A1Q9BZW2 595 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 PACSIN3Q9UKS6 424 aa13.07□□□□□ -0.32
HSPG2-211ENST00000486901 G3BP2Q9UN86 482 aaKnown RBP13.07□□□□□ -0.32
HSPG2-211ENST00000486901 MEI4A8MW99 385 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 TBX10O75333 385 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 BBOX1O75936 387 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 STK10O94804 968 aaKnown RBP13.06□□□□□ -0.32
HSPG2-211ENST00000486901 PPP2R5CQ13362 524 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 STAT4Q14765 748 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 CLNKQ7Z7G1 428 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 NLRX1Q86UT6 975 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 COA1Q9GZY4 146 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 LRMDAQ9H2I8 198 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 C1orf112Q9NSG2 853 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 CPSF2Q9P2I0 782 aaKnown RBP13.06□□□□□ -0.32
HSPG2-211ENST00000486901 UVRAGQ9P2Y5 699 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 TJP2Q9UDY2 1190 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 H3BRJ5 948 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 SMAPO00193 183 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 MARK3P27448 753 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 NPTX2P47972 431 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 KLC1Q07866 573 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 NFX1Q12986 1120 aaKnown RBP13.06□□□□□ -0.32
HSPG2-211ENST00000486901 MOGSQ13724 837 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 TSNAXIP1Q2TAA8 658 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 FNBP1LQ5T0N5 605 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 GRK7Q8WTQ7 553 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 CFAP57Q96MR6 1250 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 RAVER2Q9HCJ3 691 aaKnown RBP13.06□□□□□ -0.32
HSPG2-211ENST00000486901 KMT5AQ9NQR1 393 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 CCPG1Q9ULG6 757 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms