RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TSPAN6O43657 245 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 PLEKHA8P1O95397 391 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 C22orf31O95567 290 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 PSAPP07602 524 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 CCDC159P0C7I6 412 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 SDHBP21912 280 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 EIF4BP23588 611 aaKnown RBP7.51□□□□□ -1.21
HDAC3-209ENST00000486618 ITGB7P26010 798 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 NLRP11P59045 1033 aaKnown RBP7.51□□□□□ -1.21
HDAC3-209ENST00000486618 FANCCQ00597 558 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 ITGB3BPQ13352 177 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-209ENST00000486618 CLLU1OSQ5K130 101 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 ACBD5Q5T8D3 534 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-209ENST00000486618 C15orf39Q6ZRI6 1047 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 NIPA1Q7RTP0 329 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 HEATR3Q7Z4Q2 680 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 CCDC60Q8IWA6 550 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-209ENST00000486618 STAMQ92783 540 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 NXPE3Q969Y0 559 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 FAM167AQ96KS9 214 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 SCLT1Q96NL6 688 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 NSUN5Q96P11 429 aaKnown RBP7.51□□□□□ -1.21
HDAC3-209ENST00000486618 MYL10Q9BUA6 226 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 EMILIN2Q9BXX0 1053 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 GLT8D2Q9H1C3 349 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 LY9Q9HBG7 655 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 STIM2Q9P246 746 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 DPP7Q9UHL4 492 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 MAFFQ9ULX9 164 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 AKT3Q9Y243 479 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 IKBKGQ9Y6K9 419 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 R4GN57 208 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 WDR87Q6ZQQ6 2873 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 DENND4AQ7Z401 1863 aa7.51□□□□□ -1.21
HDAC3-209ENST00000486618 J3QW42 95 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 ZBTB39O15060 712 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 ZC3H11AO75152 810 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 TCEA3O75764 348 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 CCNE2O96020 404 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 RPL17P18621 184 aaKnown RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 KLRC2P26717 231 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 GBP2P32456 591 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 ZNF132P52740 706 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 NAPAP54920 295 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 ANTXR2P58335 489 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 CDC42EP1Q00587 391 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 NUCB1Q02818 461 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 RNASELQ05823 741 aaKnown RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 AP3B2Q13367 1082 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 TMED1Q13445 227 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 NFE2Q16621 373 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 RSPO4Q2I0M5 234 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 LETM2Q2VYF4 491 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 EFCAB12Q6NXP0 572 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 CYP26C1Q6V0L0 522 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 OTUD6AQ7L8S5 288 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 PLA2G4DQ86XP0 818 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 RAVER1Q8IY67 606 aaKnown RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 MB21D2Q8IYB1 491 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 ARL6IP6Q8N6S5 226 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 AUTS2Q8WXX7 1259 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 E2F7Q96AV8 911 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 IGSF21Q96ID5 467 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 MPP4Q96JB8 637 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 TMEM87BQ96K49 555 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 POLR3CQ9BUI4 534 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-209ENST00000486618 ANO3Q9BYT9 981 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 ADAMTS10Q9H324 1103 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 RIC8AQ9NPQ8 531 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 NRBP2Q9NSY0 501 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 TBC1D22BQ9NU19 505 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 DLL3Q9NYJ7 618 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 TMEM63CQ9P1W3 806 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 SEPT3Q9UH03 358 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 C2orf16Q68DN1 1984 aa7.5□□□□□ -1.21
HDAC3-209ENST00000486618 GPR179Q6PRD1 2367 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 VPS13AQ96RL7 3174 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 WDR81Q562E7 1941 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 DCHS1Q96JQ0 3298 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 DOCK8Q8NF50 2099 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 hCG_1642624A0A1W2PR95 340 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 hCG_1984214I3L0E3 225 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 GALTP07902 379 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SP9P0CG40 484 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SRFP11831 508 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 DARSP14868 501 aaKnown RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 PSMA3P25788 255 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 MCM5P33992 734 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 SREBF1P36956 1147 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 LIFRP42702 1097 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 PPM1FP49593 454 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 CLCN3P51790 818 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 ADCY7P51828 1080 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 GEMIN4P57678 1058 aaKnown RBP7.49□□□□□ -1.21
HDAC3-209ENST00000486618 PTH1RQ03431 593 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 MORC3Q14149 939 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 PTPN14Q15678 1187 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 ARSHQ5FYA8 562 aa7.49□□□□□ -1.21
HDAC3-209ENST00000486618 NKAPLQ5M9Q1 402 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms