RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SYKP43405 635 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 CYP2J2P51589 502 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 BFSP1Q12934 665 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 IQCEQ6IPM2 695 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 EPM2AIP1Q7L775 607 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-208ENST00000486404 FBXL6Q8N531 539 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 FSIP1Q8NA03 581 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 ING5Q8WYH8 240 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 CCDC47Q96A33 483 aaKnown RBP13.91□□□□□ -0.18
CHMP3-208ENST00000486404 PGLYRP2Q96PD5 576 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 SMOC2Q9H3U7 446 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 SLC39A2Q9NP94 309 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 AGPAT3Q9NRZ7 376 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 ITGA11Q9UKX5 1188 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 CDH7Q9ULB5 785 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 DUSP12Q9UNI6 340 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 MRPS23Q9Y3D9 190 aaKnown RBP13.91□□□□□ -0.18
CHMP3-208ENST00000486404 YIPF1Q9Y548 306 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 CYB561D2O14569 222 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 SPTLC1O15269 473 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 TNNC2P02585 160 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 MYL1P05976 194 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 RHOP08100 348 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 WNT7BP56706 349 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 TWF1Q12792 350 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 MYBPC2Q14324 1141 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 SURF1Q15526 300 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 SNRNP35Q16560 246 aaKnown RBP13.9□□□□□ -0.18
CHMP3-208ENST00000486404 RNF19BQ6ZMZ0 732 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 MTSS1LQ765P7 747 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 PDZD4Q76G19 769 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-208ENST00000486404 BMP8AQ7Z5Y6 402 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 CBWD2Q8IUF1 395 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 ZNF507Q8TCN5 953 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 FGF13Q92913 245 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 NXPE3Q969Y0 559 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 ASIC4Q96FT7 647 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 PAGE5Q96GU1 130 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 CCDC34Q96HJ3 373 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 CORO1BQ9BR76 489 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 PDE11AQ9HCR9 933 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 DNMT3BQ9UBC3 853 aaKnown RBP13.9□□□□□ -0.18
CHMP3-208ENST00000486404 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 ZDBF2Q9HCK1 2354 aa13.9□□□□□ -0.18
CHMP3-208ENST00000486404 A0A1W2PQ27 194 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 A0A1W2PQ64 194 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 A0A1W2PQD8 194 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 GOLGA6L4A6NEF3 574 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 CLSTN1O94985 981 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 SEC24AO95486 1093 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 PTPN2P17706 415 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 ALDH1A3P47895 512 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 SNRPFP62306 86 aaKnown RBP13.89□□□□□ -0.19
CHMP3-208ENST00000486404 NUCB2P80303 420 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 EHHADHQ08426 723 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 MYO1EQ12965 1108 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 GPR17Q13304 367 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 HTR4Q13639 388 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 CYP4A22Q5TCH4 519 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 LMBRD2Q68DH5 695 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-208ENST00000486404 NPAS3Q8IXF0 933 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 LRRC52Q8N7C0 313 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 C1orf127Q8N9H9 656 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 XXYLT1Q8NBI6 393 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 ITFG1Q8TB96 612 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 GOLGA5Q8TBA6 731 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 RSAD2Q8WXG1 361 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 ZNF512Q96ME7 567 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-208ENST00000486404 FNBP1Q96RU3 617 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 ASAH2Q9NR71 780 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
CHMP3-208ENST00000486404 HPSEQ9Y251 543 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 NUMBLQ9Y6R0 609 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 MUC6Q6W4X9 2439 aa13.89□□□□□ -0.19
CHMP3-208ENST00000486404 NUP210Q8TEM1 1887 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-208ENST00000486404 MIA3Q5JRA6 1907 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 ZNF197O14709 1029 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 CLIC2O15247 247 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 HUS1O60921 280 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 CYP11A1P05108 521 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 DLATP10515 647 aaKnown RBP13.88□□□□□ -0.19
CHMP3-208ENST00000486404 HOXD13P35453 343 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 NDUFA8P51970 172 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 EPHB3P54753 998 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 RBP5P82980 135 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 TSPY1Q01534 308 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
CHMP3-208ENST00000486404 BMT2Q1RMZ1 405 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 KMT5BQ4FZB7 885 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 SLC39A12Q504Y0 691 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 WDR49Q8IV35 697 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 CSGALNACT2Q8N6G5 542 aa13.88□□□□□ -0.19
CHMP3-208ENST00000486404 LEMD2Q8NC56 503 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms