RNA–Protein interactions for RNA: ENST00000485412.1

SQSTM1-208, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-208ENST00000485412 DNAJC25Q9H1X3 360 aa15.08■□□□□ 0
SQSTM1-208ENST00000485412 AFF4Q9UHB7 1163 aaKnown RBP15.08■□□□□ 0
SQSTM1-208ENST00000485412 PCDHB8Q9UN66 801 aa15.08■□□□□ 0
SQSTM1-208ENST00000485412 YIPF1Q9Y548 306 aa15.08■□□□□ 0
SQSTM1-208ENST00000485412 OBSL1O75147 1896 aa15.08■□□□□ 0
SQSTM1-208ENST00000485412 TTC26A0AVF1 554 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 VWA3AA6NCI4 1184 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 HEPACAM2A8MVW5 462 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 LAD1O00515 517 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 HRO43593 1189 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 FOXD2O60548 495 aaPredicted RBP15.07■□□□□ 0
SQSTM1-208ENST00000485412 SOAT2O75908 522 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 PLA2G4BP0C869 781 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 HOXC13P31276 330 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 CNR2P34972 360 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 KPNA1P52294 538 aaPredicted RBP15.07■□□□□ 0
SQSTM1-208ENST00000485412 EPHA5P54756 1037 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 DMWDQ09019 674 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 STRN3Q13033 797 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 ZBTB6Q15916 424 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 TMEM119Q4V9L6 283 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 WDR44Q5JSH3 913 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 HEATR6Q6AI08 1181 aaKnown RBP15.07■□□□□ 0
SQSTM1-208ENST00000485412 MCTP1Q6DN14 999 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 C1orf228Q6PIY5 440 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 ZPBP2Q6X784 338 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 CEP68Q76N32 757 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 TMC8Q8IU68 726 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 MFSD6LQ8IWD5 586 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 FAM200AQ8TCP9 573 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 E2F7Q96AV8 911 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 KIF12Q96FN5 646 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 MSANTD3Q96H12 275 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 LRRC3Q9BY71 257 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 C17orf75Q9HAS0 396 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 STK24Q9Y6E0 443 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 GREB1Q4ZG55 1949 aa15.07■□□□□ 0
SQSTM1-208ENST00000485412 ATG2BQ96BY7 2078 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 LACTBL1A8MY62 500 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 M0QZQ0 153 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 ARNTLO00327 626 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 CLDN3O15551 220 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 GDF9O60383 454 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 AARSP49588 968 aaKnown RBP eCLIP15.06■□□□□ 0
SQSTM1-208ENST00000485412 NCKAP1LP55160 1127 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 GRIN1Q05586 938 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 DUSP4Q13115 394 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 SRSF5Q13243 272 aaKnown RBP15.06■□□□□ 0
SQSTM1-208ENST00000485412 GAS6Q14393 721 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 ENOX2Q16206 610 aaKnown RBP15.06■□□□□ 0
SQSTM1-208ENST00000485412 IL31Q6EBC2 164 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 SLC39A4Q6P5W5 647 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 LONP2Q86WA8 852 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 APPL2Q8NEU8 664 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 BEST2Q8NFU1 509 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 DDX1Q92499 740 aaKnown RBP15.06■□□□□ 0
SQSTM1-208ENST00000485412 LRRC3BQ96PB8 259 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 REEP2Q9BRK0 252 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 GPR88Q9GZN0 384 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 IKZF4Q9H2S9 585 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 C8orf33Q9H7E9 229 aaPredicted RBP15.06■□□□□ 0
SQSTM1-208ENST00000485412 TRPV4Q9HBA0 871 aa15.06■□□□□ 0
SQSTM1-208ENST00000485412 RBM12Q9NTZ6 932 aaKnown RBP15.06■□□□□ 0
SQSTM1-208ENST00000485412 SPAG17Q6Q759 2223 aa15.05■□□□□ 0
SQSTM1-208ENST00000485412 A0A1W2PRU2 124 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 SLC38A8A6NNN8 435 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 TISP43B9A030 160 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 OAZ2O95190 189 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 CLTAP09496 248 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 MARCKSP29966 332 aaPredicted RBP15.05■□□□□ -0
SQSTM1-208ENST00000485412 LRPAP1P30533 357 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 MATR3P43243 847 aaKnown RBP eCLIP15.05■□□□□ -0
SQSTM1-208ENST00000485412 SOX9P48436 509 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 MLLT6P55198 1093 aaPredicted RBP15.05■□□□□ -0
SQSTM1-208ENST00000485412 YWHAHQ04917 246 aaPredicted RBP15.05■□□□□ -0
SQSTM1-208ENST00000485412 DHX8Q14562 1220 aaKnown RBP15.05■□□□□ -0
SQSTM1-208ENST00000485412 AASDHQ4L235 1098 aaPredicted RBP15.05■□□□□ -0
SQSTM1-208ENST00000485412 HAUS6Q7Z4H7 955 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 ATAD1Q8NBU5 361 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 BICD1Q96G01 975 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 MKNK1Q9BUB5 465 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 TIPINQ9BVW5 301 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 MAFFQ9ULX9 164 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 SLC27A5Q9Y2P5 690 aa15.05■□□□□ -0
SQSTM1-208ENST00000485412 ZNF638Q14966 1978 aaKnown RBP15.05■□□□□ -0
SQSTM1-208ENST00000485412 CNOT1A5YKK6 2376 aaKnown RBP15.04■□□□□ -0
SQSTM1-208ENST00000485412 CHADO15335 359 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 PAPSS2O95340 614 aaPredicted RBP15.04■□□□□ -0
SQSTM1-208ENST00000485412 SMTNP53814 917 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 PLD1Q13393 1074 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 DGKKQ5KSL6 1271 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 FAM160A2Q8N612 972 aaPredicted RBP15.04■□□□□ -0
SQSTM1-208ENST00000485412 BLOC1S4Q9NUP1 217 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 C2orf42Q9NWW7 574 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 ANGPTL2Q9UKU9 493 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 USP24Q9UPU5 2620 aa15.04■□□□□ -0
SQSTM1-208ENST00000485412 SDK1Q7Z5N4 2213 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 MTMR11A4FU01 709 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 K7ESF4 209 aa15.03■□□□□ -0
SQSTM1-208ENST00000485412 DPYSL4O14531 572 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms